RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 TOM1L1O75674 476 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 TSPY4P0CV99 314 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 TSPY10P0CW01 314 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 CEBPBP17676 345 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 PTPN4P29074 926 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 ACADSBP45954 432 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 MTTPP55157 894 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 LINC01547P58512 204 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-203ENST00000478840 BTG1P62324 171 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 NME3Q13232 169 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 KRT81Q14533 505 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 ARHGAP17Q68EM7 881 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 FAM53AQ6NSI3 398 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-203ENST00000478840 PARP8Q8N3A8 854 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 OR5M9Q8NGP3 310 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 FBXO30Q8TB52 745 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 MAPK15Q8TD08 544 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 SMAP2Q8WU79 429 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-203ENST00000478840 TMEM190Q8WZ59 177 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 FCGR1BQ92637 280 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 PCED1BQ96HM7 432 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 TXN2Q99757 166 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 HOXD1Q9GZZ0 328 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 MTHFD2LQ9H903 347 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-203ENST00000478840 ACTR8Q9H981 624 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 CENPMQ9NSP4 180 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 MED17Q9NVC6 651 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 TMOD2Q9NZR1 351 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 ZNF490Q9ULM2 529 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-203ENST00000478840 DUSP12Q9UNI6 340 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 WDR37Q9Y2I8 494 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 WIPI2Q9Y4P8 454 aa4.45□□□□□ -1.7
UPF3B-203ENST00000478840 A0A1B0GUL7 405 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 C15orf61A6NNL5 157 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 PMS2P5A8MQ11 134 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 E9PMD0 336 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 SGK494L7N484 410 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 PDXKO00764 312 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 KCNAB3O43448 404 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 IDH1O75874 414 aaKnown RBP4.44□□□□□ -1.7
UPF3B-203ENST00000478840 CD48P09326 243 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 EZRP15311 586 aaKnown RBP4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ANOS1P23352 680 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 CCKARP32238 428 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 GPR183P32249 361 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 SOX6P35712 828 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 TRPC1P48995 793 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ARFIP1P53367 373 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 PHEXP78562 749 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 FHL1Q13642 323 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 RFTN2Q52LD8 501 aaPredicted RBP4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ARMCX2Q7L311 632 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 MISPQ8IVT2 679 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 OR4N5Q8IXE1 308 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 TMEM178AQ8NBL3 297 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ZNF606Q8WXB4 792 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 TMEM37Q8WXS4 190 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 CCDC51Q96ER9 411 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 RAB11FIP5Q9BXF6 653 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 PINK1Q9BXM7 581 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 TEX13BQ9BXU2 312 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 CXXC4Q9H2H0 198 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 TSPY26PQ9H489 355 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 GDF3Q9NR23 364 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 BCAP29Q9UHQ4 241 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 XPO7Q9UIA9 1087 aaKnown RBP4.44□□□□□ -1.7
UPF3B-203ENST00000478840 MFHAS1Q9Y4C4 1052 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ATG4BQ9Y4P1 393 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 ABCC4O15439 1325 aa4.44□□□□□ -1.7
UPF3B-203ENST00000478840 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 A0A0U1RQV5 110 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 GLTPD2A6NH11 291 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 BUB1O43683 1085 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 TLX2O43763 284 aaPredicted RBP4.43□□□□□ -1.7
UPF3B-203ENST00000478840 KIAA0513O60268 411 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 TSPAN2O60636 221 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 CSO75390 466 aaKnown RBP4.43□□□□□ -1.7
UPF3B-203ENST00000478840 NDUFA7O95182 113 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 FCER2P06734 321 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 RRASP10301 218 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 CYP2F1P24903 491 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 PTPN6P29350 595 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 ZFP36L2P47974 494 aaKnown RBP4.43□□□□□ -1.7
UPF3B-203ENST00000478840 NPY2RP49146 381 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 PAX9P55771 341 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 OVGP1Q12889 678 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 ADPRMQ3LIE5 342 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 LRIT3Q3SXY7 679 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 ACSF3Q4G176 576 aaPredicted RBP4.43□□□□□ -1.7
UPF3B-203ENST00000478840 TMEM41BQ5BJD5 291 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 LIPKQ5VXJ0 399 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
UPF3B-203ENST00000478840 PAQR9Q6ZVX9 377 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 HOGA1Q86XE5 327 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 GVQW1Q8N7I0 195 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 FADS6Q8N9I5 356 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 OR6S1Q8NH40 331 aa4.43□□□□□ -1.7
UPF3B-203ENST00000478840 RDH11Q8TC12 318 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms