RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MTTPP55157 894 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 NSUN5P2Q63ZY6 315 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 TRIM40Q6P9F5 258 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 PM20D2Q8IYS1 436 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 AGGF1Q8N302 714 aaeCLIP15.78■□□□□ 0.12
VIM-204ENST00000478746 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 SLC15A4Q8N697 577 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 OR2L5Q8NG80 312 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 ZNF721Q8TF20 911 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 DACH2Q96NX9 599 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 REXO4Q9GZR2 422 aaKnown RBP15.78■□□□□ 0.12
VIM-204ENST00000478746 COPS7BQ9H9Q2 264 aaPredicted RBP15.78■□□□□ 0.12
VIM-204ENST00000478746 CNIH4Q9P003 139 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 KIAA1549Q9HCM3 1950 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 A0A1W2PPR1 153 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 ANKDD1BA6NHY2 528 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 SMPD2O60906 423 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 C1QAP02745 245 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 GNAZP19086 355 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 GDF1P27539 372 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 CERS1P27544 350 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 GSTM2P28161 218 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 OPRM1P35372 400 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 PGGT1BP53609 377 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 CRYZQ08257 329 aaKnown RBP15.77■□□□□ 0.12
VIM-204ENST00000478746 SBSNQ6UWP8 590 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 SLCO4C1Q6ZQN7 724 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 CAPN12Q6ZSI9 719 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 LRRC75A-AS1Q8N1F1 130 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 KRT78Q8N1N4 520 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 FAM13CQ8NE31 585 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 NUBPLQ8TB37 319 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 SPACA9Q96E40 222 aaPredicted RBP15.77■□□□□ 0.12
VIM-204ENST00000478746 SENP5Q96HI0 755 aaPredicted RBP15.77■□□□□ 0.12
VIM-204ENST00000478746 Q96MF0 132 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 JKAMPQ9P055 326 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 CAMK2AQ9UQM7 478 aa15.77■□□□□ 0.12
VIM-204ENST00000478746 ATRQ13535 2644 aa15.77■□□□□ 0.11
VIM-204ENST00000478746 ZANQ9Y493 2812 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 INAFM1C9JVW0 142 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 CASKO14936 926 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 CLEC3AO75596 197 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 TRAPPC6AO75865 159 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 CCDC175P0C221 793 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 COX7A2P14406 83 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 MAGEA3P43357 314 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 ID2Q02363 134 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 SLBPQ14493 270 aaKnown RBP eCLIP15.76■□□□□ 0.11
VIM-204ENST00000478746 ADPRMQ3LIE5 342 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 ABHD17CQ6PCB6 329 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 LYPD8Q6UX82 237 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 ZNF592Q92610 1267 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 PDLIM5Q96HC4 596 aaKnown RBP15.76■□□□□ 0.11
VIM-204ENST00000478746 TRIB1Q96RU8 372 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 EGFL8Q99944 293 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 DOHHQ9BU89 302 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 NT5DC2Q9H857 520 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 IKZF3Q9UKT9 509 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 VWA7Q9Y334 891 aa15.76■□□□□ 0.11
VIM-204ENST00000478746 CD8B2A6NJW9 211 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 ACSL3O95573 720 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 IL18BPO95998 194 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 SERPINB3P29508 390 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 TGM3Q08188 693 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 PPP1R3AQ16821 1122 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 PRSS57Q6UWY2 283 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 SYDE1Q6ZW31 735 aaPredicted RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 C9orf40Q8IXQ3 194 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 DND1Q8IYX4 353 aaKnown RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 C7orf57Q8NEG2 295 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 OR10G3Q8NGC4 313 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 SMPDL3BQ92485 455 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 PIGTQ969N2 578 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 ISL2Q96A47 359 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 PIP5K1AQ99755 562 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 WDR83Q9BRX9 315 aaKnown RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 RBM24Q9BX46 236 aaKnown RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 PRDM14Q9GZV8 571 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 CALHM2Q9HA72 323 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 LYRM4Q9HD34 91 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 PRDM7Q9NQW5 492 aa15.75■□□□□ 0.11
VIM-204ENST00000478746 EIF3LQ9Y262 564 aaKnown RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 CHCHD2Q9Y6H1 151 aaPredicted RBP15.75■□□□□ 0.11
VIM-204ENST00000478746 STAB1Q9NY15 2570 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 SH3D21A4FU49 640 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 MBD3L4A6NDZ8 208 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 MBD3L3A6NE82 208 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 MBD3L5A6NJ08 208 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 DYRK3O43781 588 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 WDR47O94967 919 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 LRATO95237 230 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 TBX6O95947 436 aaPredicted RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 GDF5P43026 501 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 MSH2P43246 934 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 RPL21P46778 160 aaKnown RBP15.74■□□□□ 0.11
VIM-204ENST00000478746 HNMTP50135 292 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 CRYMQ14894 314 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 VASNQ6EMK4 673 aa15.74■□□□□ 0.11
VIM-204ENST00000478746 MBD3L2Q8NHZ7 208 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms