RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ADAM29Q9UKF5 820 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF451Q9Y4E5 1061 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 POLR3HQ9Y535 204 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 SVILO95425 2214 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 COL12A1Q99715 3063 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 BLACEA4D250 179 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 WASHC1A8K0Z3 465 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 PIP5K1BO14986 540 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ITM2AO43736 263 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 CTNSO60931 367 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 C1QL1O75973 258 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 F10P00742 488 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 SERPINE1P05121 402 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 DHRS4L1P0CG22 281 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ICAM2P13598 275 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TNNI3P19429 210 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TIA1P31483 386 aaKnown RBP eCLIP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 SERPINB5P36952 375 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 CD97P48960 835 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ST13P50502 369 aaKnown RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 WDR4P57081 412 aaKnown RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 SLC26A5P58743 744 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TAS2R50P59544 299 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ABCE1P61221 599 aaKnown RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF33BQ06732 778 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 NR6A1Q15406 480 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 EXT1Q16394 746 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 GALNTL6Q49A17 601 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 B3GNTL1Q67FW5 361 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 OR52E8Q6IFG1 317 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ATG14Q6ZNE5 492 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 PRICKLE2Q7Z3G6 844 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 CHTF18Q8WVB6 975 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TANKQ92844 425 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ANKRD9Q96BM1 317 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ATP6V1G3Q96LB4 118 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 PPP1R36Q96LQ0 422 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 IMMP1LQ96LU5 166 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 DGAT2Q96PD7 388 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 SMAD5Q99717 465 aaKnown RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TUBB1Q9H4B7 451 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 KCNK13Q9HB14 408 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ADAP2Q9NPF8 381 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 LUZP4Q9P127 313 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 ZDHHC2Q9UIJ5 367 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 MCM8Q9UJA3 840 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TRAF6Q9Y4K3 522 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 CLDN16Q9Y5I7 305 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 HEMK1Q9Y5R4 338 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-215ENST00000478531 DNAJC15Q9Y5T4 150 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 CLCA3PQ9Y6N3 262 aa6.45□□□□□ -1.38
BRCA1-215ENST00000478531 TRBV11-1A0A0K0K1C0 115 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 A0A1W2PS29 197 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 C17orf105B2RV13 164 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TMEM114B3SHH9 223 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PGRMC2O15173 223 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 RGS14O43566 566 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 OR10H2O60403 315 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 GUCY1B2O75343 617 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SEC22BO75396 215 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ERAL1O75616 437 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SASH3O75995 380 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 RSL1D1O76021 490 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 IL3P08700 152 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ANXA4P09525 319 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 COX7A2P14406 83 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PIK3R1P27986 724 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SLC1A6P48664 564 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 AP2B1P63010 937 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 RPL38P63173 70 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 RAE1P78406 368 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PLIN5Q00G26 463 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 STX3Q13277 289 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SERTAD2Q14140 314 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ELAVL1Q15717 326 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PDCD2Q16342 344 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 FAM180BQ6P0A1 224 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TRIM46Q7Z4K8 759 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 CLYBLQ8N0X4 340 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF843Q8N446 348 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF781Q8N8C0 355 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 TEX19Q8NA77 164 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 OR2T11Q8NH01 316 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 M1APQ8TC57 530 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 DOK4Q8TEW6 326 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 THAP3Q8WTV1 239 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 NCLNQ969V3 563 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PPWD1Q96BP3 646 aaKnown RBP6.44□□□□□ -1.38
BRCA1-215ENST00000478531 KLHL29Q96CT2 875 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 FAIM2Q9BWQ8 316 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 OR8D2Q9GZM6 311 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 EPS8L2Q9H6S3 715 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 VIPAS39Q9H9C1 493 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 LRTM1Q9HBL6 345 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 PFDN4Q9NQP4 134 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 GIMAP2Q9UG22 337 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 DLGAP4Q9Y2H0 992 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 ATP6AP2A0A1C7CYW4 349 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SERTM1A2A2V5 107 aa6.44□□□□□ -1.38
BRCA1-215ENST00000478531 SLC28A1O00337 649 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms