RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SLC17A7Q9P2U7 560 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 MID2Q9UJV3 735 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ADAM29Q9UKF5 820 aa14.54□□□□□ -0.08
HMGA1-206ENST00000478214 COPG1Q9Y678 874 aaKnown RBP14.54□□□□□ -0.08
HMGA1-206ENST00000478214 ARHGAP10A1A4S6 786 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 GABRR3A8MPY1 467 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 PGRMC2O15173 223 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 HSD3B1P14060 373 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 TNNI3P19429 210 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 HSD3B2P26439 372 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 DEKP35659 375 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 MLF1P58340 268 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 NAA20P61599 178 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 CSTF3Q12996 717 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 CCNYL2Q5T2Q4 361 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 LIPMQ5VYY2 423 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 TUBA3EQ6PEY2 450 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 SCIMPQ6UWF3 145 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 LGI4Q8N135 537 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 C1orf52Q8N6N3 182 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 OR14A16Q8NHC5 309 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 SREK1Q8WXA9 508 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 DAZLQ92904 295 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 PPWD1Q96BP3 646 aaKnown RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 ZBTB9Q96C00 473 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 FAM111AQ96PZ2 611 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 GATA5Q9BWX5 397 aaPredicted RBP14.53□□□□□ -0.08
HMGA1-206ENST00000478214 ACPTQ9BZG2 426 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 SHCBP1LQ9BZQ2 653 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 CLMPQ9H6B4 373 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 WDR41Q9HAD4 459 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 TNFRSF12AQ9NP84 129 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 NMRK1Q9NWW6 199 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 VPS29Q9UBQ0 182 aa14.53□□□□□ -0.08
HMGA1-206ENST00000478214 C17orf105B2RV13 164 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 PRKNO60260 465 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 PRAMEF2O60811 474 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 VPS4BO75351 444 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 ZIC2O95409 532 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 GPR75O95800 540 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 DDAH2O95865 285 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 CD96P40200 585 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 STT3AP46977 705 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 UQCRFS1P47985 274 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 MAPK12P53778 367 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 HMGCS1Q01581 520 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF468Q5VIY5 522 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 RPUSD3Q6P087 351 aaKnown RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 DGAT2L6Q6ZPD8 337 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF321PQ8N8H1 164 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 GBP7Q8N8V2 638 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 GALNT11Q8NCW6 608 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 MORN4Q8NDC4 146 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 SLC2A12Q8TD20 617 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 TCP10LQ8TDR4 215 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 GRHL3Q8TE85 626 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 DOK4Q8TEW6 326 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 CHTF18Q8WVB6 975 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 DGAT2Q96PD7 388 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 SIGLEC12Q96PQ1 595 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 SMC6Q96SB8 1091 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 UTP23Q9BRU9 249 aaKnown RBP14.52□□□□□ -0.09
HMGA1-206ENST00000478214 OR8D2Q9GZM6 311 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 VPS4AQ9UN37 437 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 FLNCQ14315 2725 aa14.52□□□□□ -0.09
HMGA1-206ENST00000478214 CPAMD8Q8IZJ3 1885 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 A0A1W2PS29 197 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 CCDC151A5D8V7 595 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 TCP11X1B4DZS4 312 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 RGS16O15492 202 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 TRIM13O60858 407 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 ZFAND5O76080 213 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 COX7A2P14406 83 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 ALOX15P16050 662 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 GNLYP22749 145 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 SERPINB3P29508 390 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 ALDH3A1P30838 453 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 PLIN5Q00G26 463 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 OC90Q02509 493 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 OR1C1Q15619 314 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 NDUFAF5Q5TEU4 345 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 SPINK14Q6IE38 97 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 OR52E8Q6IFG1 317 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 C16orf47Q6ZP98 133 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 MMP21Q8N119 569 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 ARMC10Q8N2F6 343 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 MDS2Q8NDY4 140 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 C7orf57Q8NEG2 295 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 SUN3Q8TAQ9 357 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 RBM18Q96H35 190 aaKnown RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 BARD1Q99728 777 aaKnown RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 MECRQ9BV79 373 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 HES7Q9BYE0 225 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 LIN28AQ9H9Z2 209 aaKnown RBP14.51□□□□□ -0.09
HMGA1-206ENST00000478214 SHANK1Q9Y566 2161 aa14.51□□□□□ -0.09
HMGA1-206ENST00000478214 TMEM200CA6NKL6 621 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 HRKO00198 91 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 TYROBPO43914 113 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms