RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRKACGP22612 351 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 IMPA1P29218 277 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MMP12P39900 470 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CCR2P41597 374 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RANBP1P43487 201 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 BDKRB1P46663 353 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CLK3P49761 638 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 DAPP51397 102 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 C21orf59P57076 290 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CSNK2BP67870 215 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RAE1P78406 368 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PHEXP78562 749 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZXDAP98168 799 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RBBP4Q09028 425 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM115Q12893 351 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SLC14A1Q13336 389 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TMED1Q13445 227 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RAPSNQ13702 412 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 DDX39BQ13838 428 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF846Q147U1 533 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TEAD2Q15562 447 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF77Q15935 545 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 BCL7AQ4VC05 210 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SLC44A4Q53GD3 710 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PAGE2BQ5JRK9 111 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 LRRC73Q5JTD7 316 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 LY6G5CQ5SRR4 150 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 KIAA1614Q5VZ46 1190 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 HIST2H2AA3Q6FI13 130 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 LAIR2Q6ISS4 152 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MED27Q6P2C8 311 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FAHD1Q6P587 224 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 GALNT18Q6P9A2 607 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 KLHL35Q6PF15 583 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM220Q6QAJ8 160 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF551Q7Z340 670 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TMCO2Q7Z6W1 182 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CYP4Z1Q86W10 505 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZC3H7AQ8IWR0 971 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SLC30A8Q8IWU4 369 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PARP8Q8N3A8 854 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 C1orf52Q8N6N3 182 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 KIAA1958Q8N8K9 716 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RASGEF1AQ8N9B8 481 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TTC29Q8NA56 475 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SMYD1Q8NB12 490 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 C11orf65Q8NCR3 313 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 BVESQ8NE79 360 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 BPIFB6Q8NFQ5 453 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 OR7G3Q8NG95 312 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 OR7A2PQ8NGA2 310 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 GOT1L1Q8NHS2 421 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CDC26Q8NHZ8 85 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZFP90Q8TF47 636 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FRS2Q8WU20 508 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CHTF18Q8WVB6 975 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FAR1Q8WVX9 515 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 IPCEF1Q8WWN9 437 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RORBQ92753 470 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SCAMP4Q969E2 229 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 UBE2E3Q969T4 207 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FKBP10Q96AY3 582 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 AP2M1Q96CW1 435 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 COQ8BQ96D53 544 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 WDR34Q96EX3 536 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 C11orf24Q96F05 449 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MED8Q96G25 268 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PLEKHA8Q96JA3 519 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 EGLN2Q96KS0 407 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PKP4Q99569 1192 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PITX2Q99697 317 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 EFCAB11Q9BUY7 163 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CHST8Q9H2A9 424 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 RIBC2Q9H4K1 309 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 EHD1Q9H4M9 534 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 DUSP21Q9H596 190 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 REEP4Q9H6H4 257 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TPT1P8Q9HAU6 139 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ITM2CQ9NQX7 267 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 KRT84Q9NSB2 600 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 TDP1Q9NUW8 608 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ATAD3AQ9NVI7 634 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FAIMQ9NVQ4 179 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ADPRHL2Q9NX46 363 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 VNN3Q9NY84 501 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PDP1Q9P0J1 537 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 WARS2Q9UGM6 360 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 NDOR1Q9UHB4 597 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ATP6V1HQ9UI12 483 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 NDRG4Q9ULP0 352 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 FZD4Q9ULV1 537 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ABCG2Q9UNQ0 655 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 CCL26Q9Y258 94 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 SAMHD1Q9Y3Z3 626 aaKnown RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF451Q9Y4E5 1061 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 PCDHGB3Q9Y5G1 929 aa4.72□□□□□ -1.65
SF3B6-202ENST00000478050 HEMK1Q9Y5R4 338 aaPredicted RBP4.72□□□□□ -1.65
SF3B6-202ENST00000478050 KCNE2Q9Y6J6 123 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms