RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ADAM5Q6NVV9 412 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CLEC17AQ6ZS10 378 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CLNKQ7Z7G1 428 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 KIAA1328Q86T90 577 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 C17orf64Q86WR6 236 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 RHOT2Q8IXI1 618 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC15A4Q8N697 577 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 PRELID2Q8N945 189 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 OR10H5Q8NGA6 315 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 OR14A16Q8NHC5 309 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 LILRB1Q8NHL6 650 aaPredicted RBP6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 NUBPLQ8TB37 319 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC2A12Q8TD20 617 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF721Q8TF20 911 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 UCN3Q969E3 161 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CAVIN3Q969G5 261 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 C1orf159Q96HA4 380 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 DMRTB1Q96MA1 342 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 FAM111AQ96PZ2 611 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SLC39A3Q9BRY0 314 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 AICDAQ9GZX7 198 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 SPNS1Q9H2V7 528 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CHRAC1Q9NRG0 131 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CLCF1Q9UBD9 225 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CAPN11Q9UMQ6 739 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ZNF148Q9UQR1 794 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 EFR3BQ9Y2G0 817 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 TCAF1Q9Y4C2 921 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 ARHGAP21Q5T5U3 1957 aa6.65□□□□□ -1.34
SPTLC1-205ENST00000477888 CR1P17927 2039 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 MYOCOSA0A1B0GUC4 107 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 URADA6NGE7 173 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 C17orf105B2RV13 164 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 H3BMM5 538 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CYR61O00622 381 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 NRDCO43847 1150 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 LMX1BO60663 402 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CTNSO60931 367 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 SMNDC1O75940 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 LRATO95237 230 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 TGM6O95932 706 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ACTL6AO96019 429 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CGAP01215 116 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 IFNA16P05015 189 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 POU2F1P14859 743 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CHMP24386 653 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 IGFBP5P24593 272 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ARNTP27540 789 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 AHRP35869 848 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 GMPRP36959 345 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CDKN1AP38936 164 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CCR8P51685 355 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 BTN3A2P78410 334 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CCZ1BP86790 482 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CCZ1P86791 482 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 DEFA6Q01524 100 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 LOXL1Q08397 574 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CCDC181Q5TID7 509 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CYB5R2Q6BCY4 276 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 VWA1Q6PCB0 445 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 LCTLQ6UWM7 567 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF595Q8IYB9 648 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 DND1Q8IYX4 353 aaKnown RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ANKRD53Q8N9V6 530 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM71DQ8N9W8 422 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ANKK1Q8NFD2 765 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 OR8K1Q8NGG5 319 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 GIMAP7Q8NHV1 300 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 GABPB2Q8TAK5 448 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 AKAP1Q92667 903 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 CTHRC1Q96CG8 243 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ZMYND19Q96E35 227 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 PGM2Q96G03 612 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF597Q96LX8 424 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 RHNO1Q9BSD3 238 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ALOXE3Q9BYJ1 711 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 OPN3Q9H1Y3 402 aaPredicted RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 HOMER3Q9NSC5 361 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 TREX1Q9NSU2 369 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 ANO10Q9NW15 660 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 LIPT1Q9Y234 373 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 DTX4Q9Y2E6 619 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 TMA7Q9Y2S6 64 aaKnown RBP6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 C15orf41Q9Y2V0 281 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 MED16Q9Y2X0 877 aa6.64□□□□□ -1.35
SPTLC1-205ENST00000477888 NBEAL2Q6ZNJ1 2754 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 MACROD2A1Z1Q3 448 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM234BA2RU67 622 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SYNDIG1LA6NDD5 238 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 ERI2A8K979 691 aaKnown RBP6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 PJA2O43164 708 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SNX4O95219 450 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 GAS8O95995 478 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 IGKV3-11P04433 115 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 CRHP06850 196 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 SERPINA6P08185 405 aa6.63□□□□□ -1.35
SPTLC1-205ENST00000477888 MPC1LP0DKB6 136 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms