RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 STON2Q8WXE9 905 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 TSLPQ969D9 159 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 TM4SF18Q96CE8 201 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 MARK4Q96L34 752 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 CCDC28BQ9BUN5 200 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 DPH1Q9BZG8 443 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 RPF2Q9H7B2 306 aaKnown RBP14.41□□□□□ -0.1
SEC13-215ENST00000477547 MIEF1Q9NQG6 463 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 AIG1Q9NVV5 245 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
SEC13-215ENST00000477547 GMNCA6NCL1 334 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 OR2W5A6NFC9 320 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PRMT3O60678 531 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 LRATO95237 230 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 CYC1P08574 325 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 G6PDP11413 515 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 MAOAP21397 527 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PPP2R1BP30154 601 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 OTX2P32243 289 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 HPCAL1P37235 193 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 EMP2P54851 167 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 DIO3P55073 304 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 HSD17B7P56937 341 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 CXADRP78310 365 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 BTG2P78543 158 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 HEPACAMQ14CZ8 416 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 TMEM198Q66K66 360 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 FAAH2Q6GMR7 532 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 MED25Q71SY5 747 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 LAPTM4BQ86VI4 370 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 SPACA3Q8IXA5 215 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PARP9Q8IXQ6 854 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PCSK5Q92824 1860 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 GFM2Q969S9 779 aaKnown RBP14.4□□□□□ -0.1
SEC13-215ENST00000477547 EGLN2Q96KS0 407 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PRDM9Q9NQV7 894 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 C5AR2Q9P296 337 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 HEY2Q9UBP5 337 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 BAIAP2L1Q9UHR4 511 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 PCDHA9Q9Y5H5 950 aa14.4□□□□□ -0.1
SEC13-215ENST00000477547 AKAP10O43572 662 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 FGF17O60258 216 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 LDB3O75112 727 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 ALOX12BO75342 701 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 CREG1O75629 220 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 RECKO95980 971 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 C8orf89P0DMQ9 161 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 WT1P19544 449 aaPredicted RBP14.39□□□□□ -0.11
SEC13-215ENST00000477547 DDCP20711 480 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 DRD4P21917 467 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 ARFIP2P53365 341 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 MC1RQ01726 317 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 ID2Q02363 134 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 FOLH1Q04609 750 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 C2orf80Q0P641 193 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 SLC48A1Q6P1K1 146 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 LANCL3Q6ZV70 420 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 RAB43Q86YS6 212 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.39□□□□□ -0.11
SEC13-215ENST00000477547 METTL21AQ8WXB1 218 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 UCN3Q969E3 161 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 KLHL29Q96CT2 875 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 SLC45A3Q96JT2 553 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 RILPQ96NA2 401 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 PTCHD1Q96NR3 888 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 CCNL2Q96S94 520 aaPredicted RBP14.39□□□□□ -0.11
SEC13-215ENST00000477547 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 SEMA3GQ9NS98 782 aa14.39□□□□□ -0.11
SEC13-215ENST00000477547 G3BP2Q9UN86 482 aaKnown RBP14.39□□□□□ -0.11
SEC13-215ENST00000477547 WBP11Q9Y2W2 641 aaKnown RBP14.39□□□□□ -0.11
SEC13-215ENST00000477547 IGKV3D-11A0A0A0MRZ8 115 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 TGFBR3LH3BV60 316 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 SCAMP2O15127 329 aaKnown RBP14.38□□□□□ -0.11
SEC13-215ENST00000477547 PGRMC2O15173 223 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 UBDO15205 165 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 SHOX2O60902 331 aaPredicted RBP14.38□□□□□ -0.11
SEC13-215ENST00000477547 IGHEP01854 428 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 DRD2P14416 443 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 IDO1P14902 403 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 STX1BP61266 288 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 TLE3Q04726 772 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 ACTN3Q08043 901 aaPredicted RBP14.38□□□□□ -0.11
SEC13-215ENST00000477547 STX4Q12846 297 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 NSDHLQ15738 373 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 BROXQ5VW32 411 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 SPATA21Q7Z572 469 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 CPLX4Q7Z7G2 160 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 MRGPREQ86SM8 312 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 FAM9CQ8IZT9 166 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 C10orf82Q8WW14 230 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 TANKQ92844 425 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 EXOSC8Q96B26 276 aaKnown RBP14.38□□□□□ -0.11
SEC13-215ENST00000477547 SEMA4CQ9C0C4 833 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 RABEP2Q9H5N1 569 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 CLMPQ9H6B4 373 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 NECTIN3Q9NQS3 549 aa14.38□□□□□ -0.11
SEC13-215ENST00000477547 EHD3Q9NZN3 535 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms