RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 EMP3P54852 163 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 RAB38P57729 211 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 SKP1P63208 163 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 SPIDRQ14159 915 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 CYP2R1Q6VVX0 501 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 DHFR2Q86XF0 187 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 CALHM3Q86XJ0 350 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 OR2T12Q8NG77 320 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 SLC26A7Q8TE54 656 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 ZNF501Q96CX3 271 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-211ENST00000476772 FGF21Q9NSA1 209 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 FTSJ1Q9UET6 329 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 BCAP29Q9UHQ4 241 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 PSME2Q9UL46 239 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 CLCA2Q9UQC9 943 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 SNX8Q9Y5X2 465 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 GMEB1Q9Y692 573 aa27.2■■□□□ 1.94
VEGFA-211ENST00000476772 CYR61O00622 381 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 NTN3O00634 580 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 CHST10O43529 356 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 NTRK1P04629 796 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 ATP6V1B2P21281 511 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 FEN1P39748 380 aaKnown RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 CDK9P50750 372 aaKnown RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 ITGA1P56199 1179 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 FXNQ16595 210 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 CLPPQ16740 277 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 NIPAL1Q6NVV3 410 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 METTL27Q8N6F8 245 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 TMEM52Q8NDY8 209 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 SUN3Q8TAQ9 357 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 LRFN3Q9BTN0 628 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 EDEM2Q9BV94 578 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 SIRT3Q9NTG7 399 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-211ENST00000476772 CUTCQ9NTM9 273 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 GIMAP4Q9NUV9 329 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 HCN3Q9P1Z3 774 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 PCDHB3Q9Y5E6 796 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 ZNF780BQ9Y6R6 833 aa27.19■■□□□ 1.94
VEGFA-211ENST00000476772 FAM227AF5H4B4 570 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 H0Y3Z8 333 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ARPC2O15144 300 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 CD59P13987 128 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 NCK1P16333 377 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 GPX2P18283 190 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 PPIBP23284 216 aaKnown RBP27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ACP1P24666 158 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ABHD18Q0P651 414 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ZFP28Q8NHY6 868 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ZNF681Q96N22 645 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 TMEM121BQ9BXQ6 578 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-211ENST00000476772 MUC13Q9H3R2 512 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 FANCEQ9HB96 536 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 PRDM9Q9NQV7 894 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 ACTR3BQ9P1U1 418 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 SNX13Q9Y5W8 968 aa27.18■■□□□ 1.94
VEGFA-211ENST00000476772 FAM220BPB1ANY3 271 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 D6RAR5 112 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 AGRPO00253 132 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 STAMBPO95630 424 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 CSNK2A2P19784 350 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-211ENST00000476772 UQCRC2P22695 453 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 AVPR1BP47901 424 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 CEBPEQ15744 281 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 PRAMEF17Q5VTA0 474 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 CCDC116Q8IYX3 515 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 GPR135Q8IZ08 494 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 MMABQ96EY8 250 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-211ENST00000476772 SERTAD3Q9UJW9 196 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 PTGER1P34995 402 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 CHI3L1P36222 383 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-211ENST00000476772 MAT1AQ00266 395 aaKnown RBP27.17■■□□□ 1.94
VEGFA-211ENST00000476772 FAM214AQ32MH5 1076 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 LCN8Q6JVE9 175 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 ANGPTL8Q6UXH0 198 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 SPATA24Q86W54 205 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 SLITRK4Q8IW52 837 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 OR4N5Q8IXE1 308 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 PSMA8Q8TAA3 256 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 PYDC1Q8WXC3 89 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 SEMA4GQ9NTN9 838 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 CORO2BQ9UQ03 480 aa27.17■■□□□ 1.94
VEGFA-211ENST00000476772 TMEM184BQ9Y519 407 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-211ENST00000476772 SCN2AQ99250 2005 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 RNF103-CHMP3A0A140T963 221 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 GP1BAP07359 652 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 GCGRP47871 477 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.16■■□□□ 1.94
VEGFA-211ENST00000476772 PHF19Q5T6S3 580 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 TLDC1Q6P9B6 456 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 TTLL10Q6ZVT0 673 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 SERPINA11Q86U17 422 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 OR4K14Q8NGD5 310 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 LRGUKQ96M69 825 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 RNPEPL1Q9HAU8 725 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 TMEM9BQ9NQ34 198 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 GPATCH2Q9NW75 528 aa27.16■■□□□ 1.94
VEGFA-211ENST00000476772 ELOVL7A1L3X0 281 aa27.15■■□□□ 1.94
VEGFA-211ENST00000476772 ZNF749O43361 778 aa27.15■■□□□ 1.94
VEGFA-211ENST00000476772 LMNAP02545 664 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms