RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 AKAP17AQ02040 695 aaKnown RBP4.88□□□□□ -1.63
SMC5-203ENST00000475540 RPA4Q13156 261 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 RCN2Q14257 317 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A4Q4UJ75 823 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A8PQ5CZ79 823 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A2Q5SQ80 823 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A1Q5TYW2 823 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A3Q5VUR7 823 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 LYPLAL1Q5VWZ2 237 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 TMEM64Q6YI46 380 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 HOOK3Q86VS8 718 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ZNF444Q8N0Y2 327 aaPredicted RBP4.88□□□□□ -1.63
SMC5-203ENST00000475540 NHLRC2Q8NBF2 726 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ATAD1Q8NBU5 361 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ITLN1Q8WWA0 313 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 MED17Q9NVC6 651 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 ZNF346Q9UL40 294 aaKnown RBP4.88□□□□□ -1.63
SMC5-203ENST00000475540 GPR132Q9UNW8 380 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 CPQQ9Y646 472 aa4.88□□□□□ -1.63
SMC5-203ENST00000475540 SPAG9O60271 1321 aaKnown RBP4.88□□□□□ -1.63
SMC5-203ENST00000475540 SERINC4A6NH21 518 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 KLLNB2CW77 178 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 B4GAT1O43505 415 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 RTN2O75298 545 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 SEMA4FO95754 770 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 OLFM2O95897 454 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 PPP2R1AP30153 589 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 ARF5P84085 180 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 ABRAXAS1Q6UWZ7 409 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 SYCP3Q8IZU3 236 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 KIAA1524Q8TCG1 905 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 GPR148Q8TDV2 347 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 SAP25Q8TEE9 199 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 RFT1Q96AA3 541 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 TMEM237Q96Q45 408 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 HSD17B14Q9BPX1 270 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 SPXQ9BT56 116 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 TSPY26PQ9H489 355 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 CLEC5AQ9NY25 188 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 AKAP7Q9P0M2 348 aaPredicted RBP4.87□□□□□ -1.63
SMC5-203ENST00000475540 ZNF319Q9P2F9 582 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
SMC5-203ENST00000475540 HOOK1Q9UJC3 728 aaKnown RBP4.87□□□□□ -1.63
SMC5-203ENST00000475540 BLOC1S6Q9UL45 172 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 CDH7Q9ULB5 785 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 ETV7Q9Y603 341 aa4.87□□□□□ -1.63
SMC5-203ENST00000475540 ZNF646O15015 1829 aaPredicted RBP4.86□□□□□ -1.63
SMC5-203ENST00000475540 A0A1W2PRV1 198 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 OOEPA6NGQ2 149 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 HMMRO75330 724 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 IGHDP01880 384 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 SLC4A1P02730 911 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 KRTAP1-4P0C5Y4 121 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 SKILP12757 684 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 CASP3P42574 277 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 MATKP42679 507 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 KCNJ1P48048 391 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 STX1BP61266 288 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 SLC3A1Q07837 685 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 TEFQ10587 303 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 CYLC2Q14093 348 aaPredicted RBP4.86□□□□□ -1.63
SMC5-203ENST00000475540 NHLRC3Q5JS37 347 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 NEPROQ6NW34 567 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 GBP6Q6ZN66 633 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 CLEC1AQ8NC01 280 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 PSMA8Q8TAA3 256 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 TSPAN18Q96SJ8 248 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 APOL2Q9BQE5 337 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 SLC39A8Q9C0K1 460 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 CUEDC2Q9H467 287 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 MRPL17Q9NRX2 175 aaKnown RBP4.86□□□□□ -1.63
SMC5-203ENST00000475540 VSIG4Q9Y279 399 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 ATP6V0A2Q9Y487 856 aa4.86□□□□□ -1.63
SMC5-203ENST00000475540 TEX48A0A1B0GUV7 120 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 KRT87PA6NCN2 255 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 NEDD8-MDP1E9PL57 170 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 NDC80O14777 642 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 STAM2O75886 525 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 CALCAP01258 141 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 IL10P22301 178 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 NT5C2P49902 561 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 ATAD3CQ5T2N8 411 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 OLFML2AQ68BL7 652 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 NUFIP2Q7Z417 695 aaKnown RBP4.85□□□□□ -1.63
SMC5-203ENST00000475540 CACUL1Q86Y37 369 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 ZNF781Q8N8C0 355 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 RASL10BQ96S79 203 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 UTP14AQ9BVJ6 771 aaKnown RBP4.85□□□□□ -1.63
SMC5-203ENST00000475540 C1orf21Q9H246 121 aa4.85□□□□□ -1.63
SMC5-203ENST00000475540 SDR42E2A6NKP2 422 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 SLC33A1O00400 549 aaPredicted RBP4.84□□□□□ -1.63
SMC5-203ENST00000475540 CCSO14618 274 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 PRPSAP2O60256 369 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 THY1P04216 161 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 HCKP08631 526 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 FHITP49789 147 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 SLC12A3P55017 1021 aa4.84□□□□□ -1.63
SMC5-203ENST00000475540 SNU13P55769 128 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms