RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PSMA8Q8TAA3 256 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 FIG4Q92562 907 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 NCLNQ969V3 563 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SLC41A2Q96JW4 573 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 C10orf90Q96M02 699 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 AMDHD1Q96NU7 426 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 PRRX2Q99811 253 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 CXorf36Q9H7Y0 433 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ACSL6Q9UKU0 697 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF780BQ9Y6R6 833 aa12.97□□□□□ -0.33
TRAF4-210ENST00000475329 TCRBV5S2A0A599 114 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 DHRS12A0PJE2 317 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 HYKKA2RU49 373 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 FITM1A5D6W6 292 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SGK494L7N484 410 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 TOX3O15405 576 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 RDH16O75452 317 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 C1QCP02747 245 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 NTRK1P04629 796 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 UMPSP11172 480 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CKMT1AP12532 417 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 PSMA4P25789 261 aaKnown RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SLC7A1P30825 629 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 GPC1P35052 558 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CDK9P50750 372 aaKnown RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 EMP3P54852 163 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 RAB38P57729 211 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SHC2P98077 582 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 VAC14Q08AM6 782 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 FAM53BQ14153 422 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 GRM7Q14831 915 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CEBPEQ15744 281 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 PROX2Q3B8N5 592 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.331e-8■■■□□ 18
TRAF4-210ENST00000475329 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 D2HGDHQ8N465 521 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 OR9A4Q8NGU2 314 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 OR5AK3PQ8NH89 298 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SFXN5Q8TD22 340 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 FAM162AQ96A26 154 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CNRIP1Q96F85 164 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CSF3RQ99062 836 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 DPYSL5Q9BPU6 564 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 CHST8Q9H2A9 424 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SMOC1Q9H4F8 434 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 ZNF768Q9H5H4 540 aaKnown RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 RPF2Q9H7B2 306 aaKnown RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 GORASP2Q9H8Y8 452 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SEMA3GQ9NS98 782 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 C6orf203Q9P0P8 240 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-210ENST00000475329 ANAPC2Q9UJX6 822 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 AP4S1Q9Y587 144 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 R4GN57 208 aa12.96□□□□□ -0.33
TRAF4-210ENST00000475329 SPTBP11277 2137 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 A8MU76 341 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM150CB9EJG8 249 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 OR2B3O76000 313 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 KCNK5O95279 499 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 NSA2O95478 260 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 CPNE6O95741 557 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 RPLP0P05388 317 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 ANKRD34CP0C6C1 535 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 MSL3P1P0C860 447 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 NELFEP18615 380 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 MPIP34949 423 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 GCKP35557 465 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 CRATP43155 626 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 AVPR1BP47901 424 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 CCL7P80098 99 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 VMACQ2NL98 169 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 GCNT6Q5T4J0 391 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 LAIR1Q6GTX8 287 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 LRRC74BQ6ZQY2 392 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 PTOV1Q86YD1 416 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 OR4K14Q8NGD5 310 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 OR5T3Q8NGG3 340 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 OR52E4Q8NGH9 312 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 IFI44Q8TCB0 444 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 ADAMTS18Q8TE60 1221 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 TCEAL3Q969E4 200 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 POP5Q969H6 163 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 MOAP1Q96BY2 351 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 DPH2Q9BQC3 489 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 LRRN3Q9H3W5 708 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 EPS8L2Q9H6S3 715 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 CLK4Q9HAZ1 481 aaKnown RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 FANCEQ9HB96 536 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 ENAMQ9NRM1 1142 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms