RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 BLACEA4D250 179 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 FAM220BPB1ANY3 271 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 H3BNX3 289 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CLIC1O00299 241 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CDX4O14627 284 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PGRMC2O15173 223 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PDPK1O15530 556 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 B3GALT2O43825 422 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 DNAJB6O75190 326 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 TNFRSF21O75509 655 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 KCNK5O95279 499 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 MED26O95402 600 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PSMG1O95456 288 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 C6orf47O95873 294 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 MYF5P13349 255 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 IL1RNP18510 177 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 GGT1P19440 569 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 UQCRC2P22695 453 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PI4KAP42356 2102 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 GRK6P43250 576 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 MTPNP58546 118 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 IGLV3-21P80748 117 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 TNFRSF17Q02223 184 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 GAB1Q13480 694 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 VEZF1Q14119 521 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PUM1Q14671 1186 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ADRM1Q16186 407 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 NDUFA9Q16795 377 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 DEFB134Q4QY38 66 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 YOD1Q5VVQ6 348 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 SAXO2Q658L1 398 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 C18orf63Q68DL7 685 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 USP53Q70EK8 1073 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 DGLUCYQ7Z3D6 616 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 TMPRSS9Q7Z410 1059 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ANKRD46Q86W74 232 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PROSER1Q86XN7 944 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 SLITRK4Q8IW52 837 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 LINC00528Q8N1L1 170 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CA13Q8N1Q1 262 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 C10orf111Q8N326 155 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 MEIOBQ8N635 442 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 EID2Q8N6I1 236 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 RNF148Q8N7C7 305 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PAPD5Q8NDF8 572 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 OR52N2Q8NGI0 321 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ADAMTS18Q8TE60 1221 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 UCN3Q969E3 161 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 POP5Q969H6 163 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CIDECQ96AQ7 238 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ZNF501Q96CX3 271 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CNRIP1Q96F85 164 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ZBED6CLQ96FA7 236 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 AHCYL2Q96HN2 611 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 REXO5Q96IC2 774 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 AMDHD1Q96NU7 426 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CCDC3Q9BQI4 270 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 NUDT22Q9BRQ3 303 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 ASPSCR1Q9BZE9 553 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PCDHAC1Q9H158 963 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 LRRN3Q9H3W5 708 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 TPT1P8Q9HAU6 139 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 SIRT3Q9NTG7 399 aaPredicted RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 SIDT1Q9NXL6 827 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 TMEM9Q9P0T7 183 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 STX18Q9P2W9 335 aaKnown RBP6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PRDM4Q9UKN5 801 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 PACSIN3Q9UKS6 424 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 VPS4AQ9UN37 437 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 CORO2BQ9UQ03 480 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 L3MBTL1Q9Y468 752 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 SNX13Q9Y5W8 968 aa6.24□□□□□ -1.41
ATG4A-207ENST00000474825 COL5A1P20908 1838 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 IGHV5-10-1A0A0J9YXX1 117 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 TCRBV5S2A0A599 114 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ELOVL7A1L3X0 281 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 HYKKA2RU49 373 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 WASHC1A8K0Z3 465 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 EVPLLA8MZ36 301 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 PLOD2O00469 737 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 ARPC2O15144 300 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FLRT2O43155 660 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 B4GALT2O60909 372 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 LRP3O75074 770 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 SLITRK5O94991 958 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CPSF4O95639 269 aaKnown RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 C1QCP02747 245 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 STATHP02808 62 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 GSNP06396 782 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 NR2F6P10588 404 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 UMPSP11172 480 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CD59P13987 128 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 FOLR1P15328 257 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CKMT2P17540 419 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 CSNK2A2P19784 350 aaPredicted RBP6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MPIP34949 423 aa6.23□□□□□ -1.41
ATG4A-207ENST00000474825 MSX2P35548 267 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms