RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 FN3KQ9H479 309 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 POFUT1Q9H488 388 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC28A3Q9HAS3 691 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 PLAC1Q9HBJ0 212 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 DUSP22Q9NRW4 184 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC22A11Q9NSA0 550 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 ABCB8Q9NUT2 735 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 RBAKQ9NYW8 714 aaPredicted RBP4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 AASSQ9UDR5 926 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 SCP2D1Q9UJQ7 156 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 GAB2Q9UQC2 676 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 DHRS7Q9Y394 339 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 GPR45Q9Y5Y3 372 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 MEGF6O75095 1541 aa4.9□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM240BA0A1B0GVZ2 78 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC15A5A6NIM6 579 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 MARCH11A6NNE9 402 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 GPR171O14626 319 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 UBDO15205 165 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CD3EAPO15446 510 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PLA2G10O15496 165 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CREG1O75629 220 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 GPX5O75715 221 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PDE8BO95263 885 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 GLUD1P00367 558 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CSF2P04141 144 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PFKMP08237 780 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CSF3P09919 207 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 RAP2AP10114 183 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 TPH1P17752 444 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 HOXC9P31274 260 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PIGAP37287 484 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 MAGEA12P43365 314 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 STARD6P59095 220 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 KIAA1024LP59773 190 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 GABPAQ06546 454 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 SPP2Q13103 211 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 KEAP1Q14145 624 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 UGT8Q16880 541 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 LGALSLQ3ZCW2 172 aaPredicted RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 SPOUT1Q5T280 376 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 LRRC8DQ7L1W4 858 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 SERINC5Q86VE9 423 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 DENND6AQ8IWF6 608 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 TMEM132CQ8N3T6 1108 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 ADAMTS14Q8WXS8 1223 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PYCR2Q96C36 320 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC25A36Q96CQ1 311 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 C7orf34Q96L11 122 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CGRRF1Q99675 332 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 EBNA1BP2Q99848 306 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 RTP3Q9BQQ7 232 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 KLHL31Q9H511 634 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PLCXD1Q9NUJ7 323 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 PAK5Q9P286 719 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 POLLQ9UGP5 575 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CA14Q9ULX7 337 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 RUVBL1Q9Y265 456 aaKnown RBP4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 NUP98P52948 1817 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 CACNA1SQ13698 1873 aa4.9□□□□□ -1.63
TMEM39A-206ENST00000473684 IQCMA0A1B0GVH7 501 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PRSS38A1L453 326 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 H7C0S8 307 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 K7ERI5 159 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 QSOX1O00391 747 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CABYRO75952 493 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PTBP3O95758 552 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 IFNA2P01563 188 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MPOP05164 745 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ASGR2P07307 311 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 NMBP08949 121 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SBK2P0C263 348 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SPP1P10451 314 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MUC1P15941 1255 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 STOMP27105 288 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ATP6V1E1P36543 226 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 KCNJ3P48549 501 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 XKP51811 444 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MAT1AQ00266 395 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 HOXC5Q00444 222 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ELP6Q0PNE2 266 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF155Q12901 538 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC9A5Q14940 896 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 PTPRRQ15256 657 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 TAF1AQ15573 450 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ARL13AQ5H913 290 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 STEAP4Q687X5 459 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 CAPN13Q6MZZ7 669 aaPredicted RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 RPL13AP3Q6NVV1 102 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 ZC3H14Q6PJT7 736 aaKnown RBP4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM111BQ6SJ93 734 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 AFTPHQ6ULP2 937 aa4.89□□□□□ -1.63
TMEM39A-206ENST00000473684 C3P1Q6ZMU1 363 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms