RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TNFSF13O75888 250 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 SNX4O95219 450 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 LRATO95237 230 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 PLAUP00749 431 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CDH1P12830 882 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 COX7A2P14406 83 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CPN1P15169 458 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 SLC25A16P16260 332 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 TBXA2RP21731 343 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ADRA1DP25100 572 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 FMO4P31512 558 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CCKARP32238 428 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 MSH2P43246 934 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 RCN2Q14257 317 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 KCNJ11Q14654 390 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 KBTBD12Q3ZCT8 623 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 MIDNQ504T8 468 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ACSBG2Q5FVE4 666 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 DCST1Q5T197 706 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ANKRD34AQ69YU3 496 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 PLXDC2Q6UX71 529 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 PPP1R21Q6ZMI0 780 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CLEC17AQ6ZS10 378 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 BBS12Q6ZW61 710 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CHMP1BQ7LBR1 199 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 APTXQ7Z2E3 356 aaKnown RBP9.3□□□□□ -0.92
CDHR3-209ENST00000472116 CLNKQ7Z7G1 428 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 REXO1L1PQ8IX06 675 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ZNF595Q8IYB9 648 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 LRRC56Q8IYG6 542 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-209ENST00000472116 RCOR2Q8IZ40 523 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 OR10G3Q8NGC4 313 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 NUBPLQ8TB37 319 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ACTL9Q8TC94 416 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 NT5CQ8TCD5 201 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 SLC2A12Q8TD20 617 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 PEX13Q92968 403 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 HAUS8Q9BT25 410 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 HEMGNQ9BXL5 484 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 OPN3Q9H1Y3 402 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-209ENST00000472116 FANCFQ9NPI8 374 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 ZFP69BQ9UJL9 534 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 C15orf41Q9Y2V0 281 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 IKBKGQ9Y6K9 419 aa9.3□□□□□ -0.92
CDHR3-209ENST00000472116 A0A088AWK7 358 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 TRBC2A0A5B9 178 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SYCE3A1L190 88 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 FRG2CA6NGY1 282 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 CAPN14A8MX76 684 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 KLF4O43474 513 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 TRIM3O75382 744 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 TMEM253P0C7T8 217 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 PAMP19021 973 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ZNF10P21506 573 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SAT1P21673 171 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 NAGLUP54802 743 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 RAB38P57729 211 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 RPP38P78345 283 aaKnown RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ACVR1Q04771 509 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 FGFBP1Q14512 234 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 GBX1Q14549 363 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 EIPR1Q53HC9 387 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 CTSL3PQ5NE16 218 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SDCCAG8Q86SQ7 713 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 WFDC8Q8IUA0 241 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 KLHDC8BQ8IXV7 354 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 OR52K1Q8NGK4 314 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SMAP2Q8WU79 429 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ATL1Q8WXF7 558 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 GCDHQ92947 438 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ZNF845Q96IR2 970 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 PACSIN1Q9BY11 444 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 PROK2Q9HC23 129 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 EIF2B3Q9NR50 452 aaKnown RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 DNAJC11Q9NVH1 559 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ZNHIT6Q9NWK9 470 aaKnown RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 MARCH4Q9P2E8 410 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 PTBP2Q9UKA9 531 aaKnown RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 CNOT11Q9UKZ1 510 aaKnown RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
CDHR3-209ENST00000472116 MAGED1Q9Y5V3 778 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 CHCHD2Q9Y6H1 151 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-209ENST00000472116 ANKRD33BA6NCL7 494 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 PABPN1LA6NDY0 278 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 CLOCKO15516 846 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 OR10H2O60403 315 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 ESR1P03372 595 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SOD3P08294 240 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 IGHV4-31P0DP07 118 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 COMTP21964 271 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 AHRP35869 848 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SRP14P37108 136 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SKIV2L2P42285 1042 aaKnown RBP9.28□□□□□ -0.92
CDHR3-209ENST00000472116 SIRPAP78324 504 aa9.28□□□□□ -0.92
CDHR3-209ENST00000472116 BTN3A2P78410 334 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms