RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 STT3AP46977 705 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 ALDH18A1P54886 795 aaKnown RBP20.88■□□□□ 0.93
C9orf3-213ENST00000471978 IGLV3-21P80748 117 aaPredicted RBP20.88■□□□□ 0.93
C9orf3-213ENST00000471978 C8orf74Q6P047 294 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 PAOXQ6QHF9 649 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 GPR180Q86V85 440 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 CA5BP1Q8WTZ4 195 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 LRRC1Q9BTT6 524 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 TRIM8Q9BZR9 551 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 COQ3Q9NZJ6 369 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 PHF11Q9UIL8 331 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 TSC22D4Q9Y3Q8 395 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 HRH3Q9Y5N1 445 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 CACNA1CQ13936 2221 aa20.88■□□□□ 0.93
C9orf3-213ENST00000471978 LRRC14BA6NHZ5 514 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 ACOT7O00154 380 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 PLPP1O14494 284 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 ZNF354AO60765 605 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 CNR1P21554 472 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 PTX3P26022 381 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 TLX1P31314 330 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 KIR3DL1P43629 444 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 NR0B1P51843 470 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 RPS13P62277 151 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 PHEXP78562 749 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 FOLH1Q04609 750 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 CKAP4Q07065 602 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 C18orf63Q68DL7 685 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 KLC3Q6P597 504 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 OPN5Q6U736 354 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 RGS9BPQ6ZS82 235 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 GK5Q6ZS86 529 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 SLC22A16Q86VW1 577 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 ZCCHC7Q8N3Z6 543 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 GOLM1Q8NBJ4 401 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 TANKQ92844 425 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 PPWD1Q96BP3 646 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 REPS1Q96D71 796 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 RBM18Q96H35 190 aaKnown RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 SENP5Q96HI0 755 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-213ENST00000471978 SGCZQ96LD1 299 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 TTTY12Q9BZ98 90 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 ATG4BQ9Y4P1 393 aa20.87■□□□□ 0.93
C9orf3-213ENST00000471978 H0YIV9 168 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 DYRK3O43781 588 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 KLK8O60259 260 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 UGDHO60701 494 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 TYK2P29597 1187 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 PHBP35232 272 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 SERPINB8P50452 374 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 ARFIP1P53367 373 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 HNRNPH2P55795 449 aaKnown RBP20.86■□□□□ 0.93
C9orf3-213ENST00000471978 PLIN5Q00G26 463 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 TNFRSF17Q02223 184 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 BIKQ13323 160 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 GTF2H2Q13888 395 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 PCBP2Q15366 365 aaKnown RBP eCLIP20.86■□□□□ 0.932e-6■■■□□ 15.6
C9orf3-213ENST00000471978 GTF2H2CQ6P1K8 395 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 DGAT2L6Q6ZPD8 337 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 CEP128Q6ZU80 1094 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 MARVELD2Q8N4S9 558 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 GPR78Q96P69 363 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 FAM173AQ9BQD7 235 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 TP63Q9H3D4 680 aaPredicted RBP20.86■□□□□ 0.93
C9orf3-213ENST00000471978 IPPKQ9H8X2 491 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 ZDHHC11Q9H8X9 412 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 SACM1LQ9NTJ5 587 aa20.86■□□□□ 0.93
C9orf3-213ENST00000471978 CPSF2Q9P2I0 782 aaKnown RBP20.86■□□□□ 0.93
C9orf3-213ENST00000471978 TNPO3Q9Y5L0 923 aaKnown RBP20.86■□□□□ 0.93
C9orf3-213ENST00000471978 PRKRAO75569 313 aaKnown RBP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 GLSO94925 669 aaPredicted RBP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 ALDOAP04075 364 aaKnown RBP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 ELAVL4P26378 380 aaKnown RBP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 BUD31P41223 144 aaPredicted RBP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 ASPHQ12797 758 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 CPSF6Q16630 551 aaKnown RBP eCLIP20.85■□□□□ 0.93
C9orf3-213ENST00000471978 MPEG1Q2M385 716 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 PIGGQ5H8A4 983 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 NDUFAF5Q5TEU4 345 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 TMEM211Q6ICI0 200 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 FAM47EQ6ZV65 393 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 GOLGA7Q7Z5G4 137 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 ZNF295-AS1Q8N0V1 137 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 NUBPLQ8TB37 319 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 LURAP1Q96LR2 239 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 VPS11Q9H270 941 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 NINJ2Q9NZG7 142 aa20.85■□□□□ 0.93
C9orf3-213ENST00000471978 HRKO00198 91 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 PROM1O43490 865 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 EEDO75530 441 aaKnown RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 SIX3O95343 332 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 IGKV3-11P04433 115 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 P04436 131 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 ALOX15P16050 662 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 PIK3CGP48736 1102 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 UBAP2Q5T6F2 1119 aaKnown RBP20.84■□□□□ 0.93
C9orf3-213ENST00000471978 C9orf40Q8IXQ3 194 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 FBXL20Q96IG2 436 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 ART5Q96L15 291 aa20.84■□□□□ 0.93
C9orf3-213ENST00000471978 SPOCK3Q9BQ16 436 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms