RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	GFRAL	Q6UXV0	394 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	GALNTL5	Q7Z4T8	443 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CNPY4	Q8N129	248 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TMEM151A	Q8N4L1	468 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	APCDD1L	Q8NCL9	501 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	ST6GALNAC3	Q8NDV1	305 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	METTL6	Q8TCB7	284 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TANK	Q92844	425 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TAAR6	Q96RI8	345 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	CNPPD1	Q9BV87	410 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	PPCS	Q9HAB8	311 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	VTI1B	Q9UEU0	232 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	TRPS1	Q9UHF7	1281 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880	NAV2	Q8IVL1	2488 aa		13.8	□□□□□ -0.2
SSR4-208	ENST00000471880		A0A0A6YYD5	115 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	WWP2	O00308	870 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	PROM1	O43490	865 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	CDH16	O75309	829 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SEMA7A	O75326	666 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SLC25A12	O75746	678 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SEMA3D	O95025	777 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	ESRRB	O95718	433 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	MLYCD	O95822	493 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	AIFM1	O95831	613 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	EDN3	P14138	238 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	KRT4	P19013	534 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	IMPDH1	P20839	514 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SSR4	P51571	173 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	MAPK12	P53778	367 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	GGTA1P	Q4G0N0	100 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	C6orf163	Q5TEZ5	329 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SLC25A25	Q6KCM7	469 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	HSDL2	Q6YN16	418 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	LGI4	Q8N135	537 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	CYP4Z2P	Q8N1L4	340 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF321P	Q8N8H1	164 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	MORN4	Q8NDC4	146 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	SLC2A12	Q8TD20	617 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	MZB1	Q8WU39	189 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	ASB15	Q8WXK1	588 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	C12orf65	Q9H3J6	166 aa	Known RBP	13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	DDX31	Q9H8H2	851 aa	Known RBP	13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	MID1IP1	Q9NPA3	183 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	NMRK1	Q9NWW6	199 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	GRID1	Q9ULK0	1009 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	STK38L	Q9Y2H1	464 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	CLDN16	Q9Y5I7	305 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880	EML6	Q6ZMW3	1958 aa		13.79	□□□□□ -0.2
SSR4-208	ENST00000471880		A0A1W2PR48	441 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	WASHC1	A8K0Z3	465 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ESPN	B1AK53	854 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	MANBA	O00462	879 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	PRKN	O60260	465 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF500	O60304	480 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	OR2J2	O76002	312 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	UNC5C	O95185	931 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	SP1	P08047	785 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ALOX15	P16050	662 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	PIK3R1	P27986	724 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	STT3A	P46977	705 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ALDH9A1	P49189	494 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	PRKAA2	P54646	552 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	KCNK10	P57789	538 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ALDH6A1	Q02252	535 aa	Known RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	BTK	Q06187	659 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	CCDC153	Q494R4	210 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	C10orf62	Q5T681	223 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	OR52E8	Q6IFG1	317 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	SCIMP	Q6UWF3	145 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ZYG11A	Q6WRX3	759 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	COMMD6	Q7Z4G1	85 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	TDRP	Q86YL5	185 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	MDS2	Q8NDY4	140 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	NR4A3	Q92570	626 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	CCDC126	Q96EE4	140 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	GAL3ST4	Q96RP7	486 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF382	Q96SR6	550 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	C1QTNF3	Q9BXJ4	246 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF717	Q9BY31	904 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	TEX10	Q9NXF1	929 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	SEC14L3	Q9UDX4	400 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	SH3BGRL2	Q9UJC5	107 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ZNF223	Q9UK11	482 aa	Predicted RBP	13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	ASB4	Q9Y574	426 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	TIMM22	Q9Y584	194 aa		13.78	□□□□□ -0.2
SSR4-208	ENST00000471880	CCDC151	A5D8V7	595 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880		A8MVJ9	347 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	ULK1	O75385	1050 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	GPR75	O95800	540 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	PROC	P04070	461 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	DEK	P35659	375 aa	Known RBP	13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	HLCS	P50747	726 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	ARFIP1	P53367	373 aa		13.77	□□□□□ -0.21
SSR4-208	ENST00000471880	NAGLU	P54802	743 aa		13.77	□□□□□ -0.21

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