RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RUNDC3BQ96NL0 473 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 TTTY12Q9BZ98 90 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 EHD1Q9H4M9 534 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ADAP2Q9NPF8 381 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 NINJ2Q9NZG7 142 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 PPT2Q9UMR5 302 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 ERVK-11Q9UQG0 969 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 YARS2Q9Y2Z4 477 aaKnown RBP7.47□□□□□ -1.21
USP48-207ENST00000471752 ASB4Q9Y574 426 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 CLCA3PQ9Y6N3 262 aa7.47□□□□□ -1.21
USP48-207ENST00000471752 EML6Q6ZMW3 1958 aa7.46□□□□□ -1.21
USP48-207ENST00000471752 C2CD3Q4AC94 2353 aa7.46□□□□□ -1.21
USP48-207ENST00000471752 ATP6AP2A0A1C7CYW4 349 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 FOXO6A8MYZ6 492 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 E9PLN8 166 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 K7EPI3 171 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 FCHO1O14526 889 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 EIF3HO15372 352 aaKnown RBP eCLIP7.46□□□□□ -1.22
USP48-207ENST00000471752 PROM1O43490 865 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 KERAO60938 352 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ATP6AP2O75787 350 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TOXO94900 526 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 LTA4HP09960 611 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 CT62P0C5K7 136 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 MYBL2P10244 700 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 COX6B1P14854 86 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TSPAN8P19075 237 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ENDOUP21128 410 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 CPN2P22792 545 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 CASQ1P31415 396 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ADH7P40394 386 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 DLX5P56178 289 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 IGLV3-21P80748 117 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 FOLH1Q04609 750 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 DUSP2Q05923 314 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 CALCOCO2Q13137 446 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ZNF267Q14586 743 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 NAA30Q147X3 362 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 TERF2Q15554 542 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 UAP1Q16222 522 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 CPSF6Q16630 551 aaKnown RBP eCLIP7.46□□□□□ -1.225e-9■■■□□ 18.3
USP48-207ENST00000471752 AP5B1Q2VPB7 878 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ZNF791Q3KP31 576 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 PIGGQ5H8A4 983 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 CDKL4Q5MAI5 379 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 PRAMEF20Q5VT98 475 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 MRM1Q6IN84 353 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 MED27Q6P2C8 311 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 HSDL2Q6YN16 418 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 THSD4Q6ZMP0 1018 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 LRRC70Q7Z2Q7 622 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 GOLGA7Q7Z5G4 137 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TMEM132CQ8N3T6 1108 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 HORMAD2Q8N7B1 307 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 NOA1Q8NC60 698 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 MORN4Q8NDC4 146 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TTLQ8NG68 377 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 OR52B6Q8NGF0 335 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 OR5M3Q8NGP4 307 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 STAG3L4Q8TBR4 150 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 UBTD2Q8WUN7 234 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ASB15Q8WXK1 588 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TMEM125Q96AQ2 219 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TSPAN17Q96FV3 270 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 KCNC2Q96PR1 638 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 TBCDQ9BTW9 1192 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 EFCAB11Q9BUY7 163 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ZDHHC11Q9H8X9 412 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ZBTB26Q9HCK0 441 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 LYRM4Q9HD34 91 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 SH2D2AQ9NP31 389 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 DMRT3Q9NQL9 472 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 SNX15Q9NRS6 342 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 FARSBQ9NSD9 589 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 TEX10Q9NXF1 929 aaPredicted RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 NSMCE4AQ9NXX6 385 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 NUDT4Q9NZJ9 180 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 SPRR3Q9UBC9 169 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 OPTCQ9UBM4 332 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 RNF14Q9UBS8 474 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 DTX4Q9Y2E6 619 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 FAM215AQ9Y5M1 114 aa7.46□□□□□ -1.22
USP48-207ENST00000471752 INTS1Q8N201 2190 aaKnown RBP7.46□□□□□ -1.22
USP48-207ENST00000471752 A0A096LPK6 155 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 LRRC3CA6NJW4 275 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 FAM90A27PA6NNH2 459 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 A8MVJ9 347 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 KLRC4-KLRK1H3BQV0 150 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 PRRG2O14669 202 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 KLK8O60259 260 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 SCELO95171 688 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 TUBB4AP04350 444 aa7.45□□□□□ -1.22
USP48-207ENST00000471752 CTAGE8P0CG41 777 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms