RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DNAJB14Q8TBM8 379 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 DAZLQ92904 295 aaKnown RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 TM4SF18Q96CE8 201 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 APIPQ96GX9 242 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 FAIM2Q9BWQ8 316 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 KCNK13Q9HB14 408 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 TEX10Q9NXF1 929 aaPredicted RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 PTGFRNQ9P2B2 879 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 PCDHA9Q9Y5H5 950 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 HEMK1Q9Y5R4 338 aaPredicted RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 CLCA3PQ9Y6N3 262 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 C1orf226A1L170 272 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 WDR91A4D1P6 747 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 SUV39H1O43463 412 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 RGS14O43566 566 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 PCDH7O60245 1069 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 NEFHP12036 1026 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 COX7A2P14406 83 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 TIA1P31483 386 aaKnown RBP eCLIP14.28□□□□□ -0.12
SDC3-203ENST00000471567 STT3AP46977 705 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 GPR143P51810 404 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 TAS2R50P59544 299 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 RAE1P78406 368 aaKnown RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 CHI3L2Q15782 390 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 UGT3A2Q3SY77 523 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 ABHD17BQ5VST6 288 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 OR4N5Q8IXE1 308 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 LGI4Q8N135 537 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 SLC5A8Q8N695 610 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 SIRT6Q8N6T7 355 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 RBMXL3Q8N7X1 1067 aaKnown RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 ANKRD42Q8N9B4 389 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 OR14A16Q8NHC5 309 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 PTPMT1Q8WUK0 201 aaPredicted RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 RBM18Q96H35 190 aaKnown RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 ZNF354BQ96LW1 612 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 DGAT2Q96PD7 388 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 ZBTB20Q9HC78 741 aaPredicted RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 NKIRAS1Q9NYS0 192 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.28□□□□□ -0.12
SDC3-203ENST00000471567 CCL27Q9Y4X3 112 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 DNAJC15Q9Y5T4 150 aa14.28□□□□□ -0.12
SDC3-203ENST00000471567 TNRC6AQ8NDV7 1962 aaKnown RBP14.27□□□□□ -0.12
SDC3-203ENST00000471567 GNG14A0A1W2PPG7 69 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 GLOD5A6NK44 160 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 CDK2AP1O14519 115 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 PGRMC2O15173 223 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 PRKRAO75569 313 aaKnown RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 UQCRHP07919 91 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 DRD2P14416 443 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 ALOX15P16050 662 aaPredicted RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 TNNI3P19429 210 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 PIK3R1P27986 724 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 ARRB2P32121 409 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 GALNSP34059 522 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 CLCN2P51788 898 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 WDR4P57081 412 aaKnown RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 ABCE1P61221 599 aaKnown RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 PLIN5Q00G26 463 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 ID2Q02363 134 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 BTKQ06187 659 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 SH2D4BQ5SQS7 431 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 LINC00696Q6ZRV3 163 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 ST13P4Q8IZP2 240 aaPredicted RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 KIRREL3Q8IZU9 778 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 AMER2Q8N7J2 671 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 APCDD1LQ8NCL9 501 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 TWIST2Q8WVJ9 160 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 HAS2Q92819 552 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 PNPLA2Q96AD5 504 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 ARL8AQ96BM9 186 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 VMP1Q96GC9 406 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 CCT7Q99832 543 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 RNF32Q9H0A6 362 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 TUBB1Q9H4B7 451 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 STMN3Q9NZ72 180 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 CES1P1Q9UKY3 287 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 PSME2Q9UL46 239 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 WBP11Q9Y2W2 641 aaKnown RBP14.27□□□□□ -0.13
SDC3-203ENST00000471567 FIS1Q9Y3D6 152 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 KALRNO60229 2985 aa14.27□□□□□ -0.13
SDC3-203ENST00000471567 MYOCOSA0A1B0GUC4 107 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 DYTNA2CJ06 578 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 WASHC1A8K0Z3 465 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 A8MUI8 341 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 C17orf105B2RV13 164 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 DYRK3O43781 588 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 HSPA4LO95757 839 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ANXA4P09525 319 aaPredicted RBP14.26□□□□□ -0.13
SDC3-203ENST00000471567 SLC35E2P0CK97 266 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 CASRP41180 1078 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 MEP1AQ16819 746 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 NADK2Q4G0N4 442 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ACER2Q5QJU3 275 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 B3GNTL1Q67FW5 361 aaPredicted RBP14.26□□□□□ -0.13
SDC3-203ENST00000471567 SLC48A1Q6P1K1 146 aa14.26□□□□□ -0.13
SDC3-203ENST00000471567 ATG14Q6ZNE5 492 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms