RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 PBKQ96KB5 322 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 OR8D2Q9GZM6 311 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 REXO4Q9GZR2 422 aaKnown RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 RBSNQ9H1K0 784 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 KLHL31Q9H511 634 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 NT5DC2Q9H857 520 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 RASSF1Q9NS23 344 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 GPRC5BQ9NZH0 403 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 Q9UFV3 132 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 MTRF1LQ9UGC7 380 aaKnown RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 FOXD3Q9UJU5 478 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF223Q9UK11 482 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 FAM215AQ9Y5M1 114 aa8.44□□□□□ -1.06
CPSF4-211ENST00000471455 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 PRRC2AP48634 2157 aaKnown RBP8.44□□□□□ -1.06
CPSF4-211ENST00000471455 ATP6AP2A0A1C7CYW4 349 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PINLYPA6NC86 204 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 LRIT2A6NDA9 550 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 TMEM200CA6NKL6 621 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 C17orf105B2RV13 164 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 G3V3Y1 287 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PGRMC1O00264 195 aaKnown RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 MSTNO14793 375 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ATP6AP2O75787 350 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 WDR47O94967 919 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 GOSR1O95249 250 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 C1GALT1C1LP0DN25 315 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF37AP17032 561 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 GABRB3P28472 473 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PPP2R1BP30154 601 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 UQCRC1P31930 480 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 KCNC1P48547 511 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ASCL1P50553 236 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 HK2P52789 917 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PLA2G16P53816 162 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 KCNJ2P63252 427 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 RNF4P78317 190 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 RUNX2Q13950 521 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 CYP1B1Q16678 543 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PPP1R3AQ16821 1122 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 MPEG1Q2M385 716 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 FLYWCH1Q4VC44 716 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 XKR6Q5GH73 641 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PAGE2BQ5JRK9 111 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 FBXW10Q5XX13 1052 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 CLNKQ7Z7G1 428 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 PDIK1LQ8N165 341 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 NRGNQ92686 78 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 VPS39Q96JC1 886 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 SCYL1Q96KG9 808 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ART5Q96L15 291 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 KCNC2Q96PR1 638 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 GPATCH1Q9BRR8 931 aaKnown RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 EHD1Q9H4M9 534 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 CNOT10Q9H9A5 744 aaKnown RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 LYRM4Q9HD34 91 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 QPCTLQ9NXS2 382 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ALKBH4Q9NXW9 302 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 VTI1BQ9UEU0 232 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 ASIC3Q9UHC3 531 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 DAPP1Q9UN19 280 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 OARD1Q9Y530 152 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 LIPGQ9Y5X9 500 aa8.43□□□□□ -1.06
CPSF4-211ENST00000471455 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
CPSF4-211ENST00000471455 A0A0G2JMM0 328 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 A0A0G2JN53 185 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 A0A1W2PPB8 328 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 A0A1W2PRS3 328 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 NPEPPSL1A6NEC2 478 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 A6NNC1 897 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 KIR3DP1A8MWS1 328 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 C4orf51C9J302 202 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 SYT5O00445 386 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 CLGNO14967 610 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 PRKNO60260 465 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 RAF1P04049 648 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 CERS1P27544 350 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 HNRNPH1P31943 449 aaKnown RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 SOX18P35713 384 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 LIM2P55344 173 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 DLX5P56178 289 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 FOXD4Q12950 439 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 BIKQ13323 160 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 LAPTM5Q13571 262 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 HIST2H2ACQ16777 129 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 ZNF750Q32MQ0 723 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 ADPRMQ3LIE5 342 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 SLC22A10Q63ZE4 541 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 HIST2H2AA3Q6FI13 130 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 RTL6Q6ICC9 239 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 PAMR1Q6UXH9 720 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 C16orf47Q6ZP98 133 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-211ENST00000471455 MAATS1Q7Z4T9 603 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 BIVMQ86UB2 503 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 KIF18BQ86Y91 864 aa8.42□□□□□ -1.06
CPSF4-211ENST00000471455 AGGF1Q8N302 714 aaeCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms