RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ERVK-8P63133 956 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 PPP1R8Q12972 351 aaKnown RBP6.64□□□□□ -1.35
BRCA1-210ENST00000471181 DUOXA1Q1HG43 343 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MYLK3Q32MK0 819 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 KHDC1LQ5JSQ8 128 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 HIST2H3PS2Q5TEC6 136 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM205Q6UW68 189 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TPRA1Q86W33 373 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 IL22RA1Q8N6P7 574 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NPRL2Q8WTW4 380 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 HSH2DQ96JZ2 352 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 TWNKQ96RR1 684 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 BTBD2Q9BX70 525 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 SMIM3Q9BZL3 60 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 MGAT4BQ9UQ53 548 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 ATG4BQ9Y4P1 393 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 CPQQ9Y646 472 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 AKAP12Q02952 1782 aa6.64□□□□□ -1.35
BRCA1-210ENST00000471181 NEMP2A6NFY4 417 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ALOX15BO15296 676 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TSPAN6O43657 245 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ENSAO43768 121 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 MTX2O75431 263 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SC5DO75845 299 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 GBAP04062 536 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SNRNP70P08621 437 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM225BP0DP42 221 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ADRB3P13945 408 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF43P17038 809 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CRHBPP24387 322 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 NSG1P42857 185 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TOB1P50616 345 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CLCNKAP51800 687 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RABGGTBP53611 331 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 HMGCS1Q01581 520 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 FLYWCH1Q4VC44 716 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TSTD2Q5T7W7 516 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ADGRD1Q6QNK2 874 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 MMAAQ8IVH4 418 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RDH12Q96NR8 316 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CCNL2Q96S94 520 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ACTL8Q9H568 366 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 VSX1Q9NZR4 365 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 DNAJB11Q9UBS4 358 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RABL2BQ9UNT1 228 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 UNC119BA6NIH7 251 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CEBPZOSA8MTT3 80 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TP53I11O14683 189 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 IRF6O14896 467 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 YY2O15391 372 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PRICKLE3O43900 615 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C8BP07358 591 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PRKCAP17252 672 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 JUNDP17535 347 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 EVI2BP34910 448 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RHBDL3P58872 404 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 UBE2G2P60604 165 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 IRF9Q00978 393 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 LAPTM4AQ15012 233 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RAB11BQ15907 218 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 Q1RN00 199 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM119Q4V9L6 283 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SPIN4Q56A73 249 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C6orf141Q5SZD1 244 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SFRP5Q5T4F7 317 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SH3PXD2AQ5TCZ1 1133 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 STEAP4Q687X5 459 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C6orf120Q7Z4R8 191 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 BPHLQ86WA6 291 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PHF13Q86YI8 300 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SLC2A12Q8TD20 617 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 INTS12Q96CB8 462 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 NUSAP1Q9BXS6 441 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OXSMQ9NWU1 459 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 VPS29Q9UBQ0 182 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 K7EPI3 171 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TCAPO15273 167 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 AMY2AP04746 511 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CKMT1AP12532 417 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RHOQP17081 205 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 BPIP17213 487 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 RPL7P18124 248 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 MAOAP21397 527 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CSKP41240 450 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SNRPD2P62316 118 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 MEP1AQ16819 746 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PRRT3Q5FWE3 981 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 FAM69BQ5VUD6 431 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TLDC1Q6P9B6 456 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 Q8N402 240 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OR51Q1Q8NH59 317 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 LRIG1Q96JA1 1093 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CSPG4P5Q96PW8 444 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SECISBP2Q96T21 854 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PLA2G12BQ9BX93 195 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 GFOD1Q9NXC2 390 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms