RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 POP7O75817 140 aaKnown RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 DNTTP04053 509 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 BCHEP06276 602 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 RHOP08100 348 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 PTPN2P17706 415 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ALOX12P18054 663 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 CD72P21854 359 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 KCNJ5P48544 419 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 METAP1P53582 386 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 OCLNQ16625 522 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 KHDRBS2Q5VWX1 349 aaKnown RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 CCBE1Q6UXH8 406 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 WFIKKN2Q8TEU8 576 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 KLHL6Q8WZ60 621 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ERLEC1Q96DZ1 483 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 SLC6A18Q96N87 628 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 YME1L1Q96TA2 773 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 MS4A8Q9BY19 250 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 PELI2Q9HAT8 420 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 CAB39Q9Y376 341 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 PLXND1Q9Y4D7 1925 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 CCDC88CQ9P219 2028 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 SLC35F4A4IF30 521 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 DYRK3O43781 588 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 VEGFDO43915 354 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 MMP20O60882 483 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 PRNPP04156 253 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 TP53P04637 393 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 KELP23276 732 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ITGB7P26010 798 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 TIE1P35590 1138 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 CASP3P42574 277 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 DEFA1P59665 94 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 DEFA3P59666 94 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ALDH6A1Q02252 535 aaKnown RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 NFE2L1Q14494 772 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 LEXMQ3ZCV2 418 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 SLC25A30Q5SVS4 291 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 PGBD2Q6P3X8 592 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 FAM83HQ6ZRV2 1179 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-209ENST00000470026 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 IL17RDQ8NFM7 739 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 RAD51AP1Q96B01 352 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ARRDC3Q96B67 414 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 IL17FQ96PD4 163 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 HOXD1Q9GZZ0 328 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 NUAK2Q9H093 628 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 EHD3Q9NZN3 535 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
BRCA1-209ENST00000470026 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 HMGN4O00479 90 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 KPNA3O00505 521 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 CTDSP2O14595 271 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 PDPK1O15530 556 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 EFCAB14O75071 495 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 FKTNO75072 461 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 CSO75390 466 aaKnown RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 CRYBB2P43320 205 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 GPR1P46091 355 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 GSTM5P46439 218 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 RPS26P62854 115 aaKnown RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 RPA4Q13156 261 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 ARHGAP19Q14CB8 494 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 MLC1Q15049 377 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 DHCR24Q15392 516 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 DCST1Q5T197 706 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 MFSD4BQ5TF39 518 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 RAET1GQ6H3X3 334 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 TMEM53Q6P2H8 277 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 TNFAIP8L2Q6P589 184 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 CD300LDQ6UXZ3 194 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 PDZD3Q86UT5 571 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 NANOGP1Q8N7R0 232 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 ZNF366Q8N895 744 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 ANKRD53Q8N9V6 530 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 TMIEQ8NEW7 156 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 OR4D11Q8NGI4 311 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 FGF11Q92914 225 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 TMEM80Q96HE8 168 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 TEFMQ96QE5 360 aaKnown RBP12.96□□□□□ -0.33
BRCA1-209ENST00000470026 SLC30A2Q9BRI3 323 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 NT5DC2Q9H857 520 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 SMURF1Q9HCE7 757 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 LHX9Q9NQ69 397 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 NPAP1Q9NZP6 1156 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 SEC14L4Q9UDX3 406 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 ATP11BQ9Y2G3 1177 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
BRCA1-209ENST00000470026 RPL36Q9Y3U8 105 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms