RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 NUBPLQ8TB37 319 aa11.78□□□□□ -0.52
TRAPPC12-216ENST00000469400 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-216ENST00000469400 SPACA9Q96E40 222 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-216ENST00000469400 TIMP4Q99727 224 aa11.78□□□□□ -0.52
TRAPPC12-216ENST00000469400 COPS7AQ9UBW8 275 aa11.78□□□□□ -0.52
TRAPPC12-216ENST00000469400 ARID1AO14497 2285 aa11.77□□□□□ -0.52
TRAPPC12-216ENST00000469400 EEF1E1-BLOC1S5C9J1V9 151 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 EEF1E1O43324 174 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 CLEC3AO75596 197 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 GNAZP19086 355 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 GSTM2P28161 218 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 GDF5P43026 501 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 CRYMQ14894 314 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 Q5PR19 223 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 NSUN5P2Q63ZY6 315 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 TTC27Q6P3X3 843 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 TRIM40Q6P9F5 258 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 VN1R5Q7Z5H4 357 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 P3H2Q8IVL5 708 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 CNTN4Q8IWV2 1026 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 C9orf40Q8IXQ3 194 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 OR10G3Q8NGC4 313 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 SLC22A8Q8TCC7 542 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 HSPBAP1Q96EW2 488 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 PDLIM5Q96HC4 596 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 SENP5Q96HI0 755 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 DACH2Q96NX9 599 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 WDR83Q9BRX9 315 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 COPS7BQ9H9Q2 264 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 PRDM7Q9NQW5 492 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 JKAMPQ9P055 326 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 VWA7Q9Y334 891 aa11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 CHCHD2Q9Y6H1 151 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-216ENST00000469400 CDC7O00311 574 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 LRATO95237 230 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 C1QAP02745 245 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 PGAM1P18669 254 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 CTSSP25774 331 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 GDF1P27539 372 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 HPDP32754 393 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 C18orf21Q32NC0 220 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 ADNP2Q6IQ32 1131 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 PM20D2Q8IYS1 436 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 KRT78Q8N1N4 520 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 RASGEF1CQ8N431 466 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 SLC15A4Q8N697 577 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 FAM13CQ8NE31 585 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 ANKRD9Q96BM1 317 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 DOHHQ9BU89 302 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 PRDM14Q9GZV8 571 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 NT5DC2Q9H857 520 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 LYRM4Q9HD34 91 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 CNIH4Q9P003 139 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 NCKAP5O14513 1909 aa11.76□□□□□ -0.53
TRAPPC12-216ENST00000469400 FBN1P35555 2871 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 MBD3L4A6NDZ8 208 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 MBD3L3A6NE82 208 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 NPEPPSL1A6NEC2 478 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 ANKDD1BA6NHY2 528 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 MBD3L5A6NJ08 208 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 CD8B2A6NJW9 211 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 HRKO00198 91 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 SMAD7O15105 426 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 TRIM3O75382 744 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 TRAPPC6AO75865 159 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 WDR47O94967 919 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 IL18BPO95998 194 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 FBXO45P0C2W1 286 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 COX7A2P14406 83 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 SERPINB3P29508 390 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 CXCR5P32302 372 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 OPRM1P35372 400 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 HNMTP50135 292 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 CDKL1Q00532 357 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 SF3B4Q15427 424 aaKnown RBP eCLIP11.75□□□□□ -0.533e-11■■■■□ 25
TRAPPC12-216ENST00000469400 VASNQ6EMK4 673 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 GALNT7Q86SF2 657 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 OR4N5Q8IXE1 308 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 DND1Q8IYX4 353 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 LRRC75A-AS1Q8N1F1 130 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 NAT8LQ8N9F0 302 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 SIMC1Q8NDZ2 872 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 MBD3L2Q8NHZ7 208 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 SMPDL3BQ92485 455 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 Q96MF0 132 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 F2RL3Q96RI0 385 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 TRIB1Q96RU8 372 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 EGFL8Q99944 293 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 MAPKAP1Q9BPZ7 522 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 PITHD1Q9GZP4 211 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 ADAM21Q9UKJ8 722 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 KIAA1549Q9HCM3 1950 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 NINQ8N4C6 2090 aa11.75□□□□□ -0.53
TRAPPC12-216ENST00000469400 FGF17O60258 216 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms