RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 COX4I1P13073 169 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 RNH1P13489 461 aaKnown RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 MTHFD2P13995 350 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 CD22P20273 847 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 ADSLP30566 484 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 VHLP40337 213 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 IRF8Q02556 426 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 CHIT1Q13231 466 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 TECRLQ5HYJ1 363 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 C1orf146Q5VVC0 180 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 B3GNTL1Q67FW5 361 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 QSOX2Q6ZRP7 698 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 LINC00696Q6ZRV3 163 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 DNAJB14Q8TBM8 379 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 MS4A6EQ96DS6 147 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 FAR2Q96K12 515 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 ZNF570Q96NI8 536 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 NPLQ9BXD5 320 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 SLC29A3Q9BZD2 475 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 NPDC1Q9NQX5 325 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 PTGFRNQ9P2B2 879 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 SLC7A8Q9UHI5 535 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 ZNF490Q9ULM2 529 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-203ENST00000468565 CSAG2Q9Y5P2 127 aa13.58□□□□□ -0.23
COL27A1-203ENST00000468565 PRRC2CQ9Y520 2896 aaKnown RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 A0A088AWK7 358 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 IGHV3-20A0A0C4DH32 117 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 OR2W5A6NFC9 320 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 TRPC5OSA6NMA1 111 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 CDC123O75794 336 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 SEC24DO94855 1032 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 TBX6O95947 436 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 ITGAMP11215 1152 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 ZNF10P21506 573 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 ACTR3P61158 418 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 SLC25A3Q00325 362 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 CUL3Q13618 768 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 ABRAXAS2Q15018 415 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 TLR1Q15399 786 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 NSDHLQ15738 373 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 EXT1Q16394 746 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 HIST2H2ACQ16777 129 aaPredicted RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 CMPK2Q5EBM0 449 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 HIST2H2AA3Q6FI13 130 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 VN1R5Q7Z5H4 357 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 CA13Q8N1Q1 262 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 SIRT6Q8N6T7 355 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 OR2L5Q8NG80 312 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 SNRNP40Q96DI7 357 aaKnown RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 OR52B2Q96RD2 323 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 RNF32Q9H0A6 362 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 EML4Q9HC35 981 aaKnown RBP13.58□□□□□ -0.24
COL27A1-203ENST00000468565 ZDHHC2Q9UIJ5 367 aa13.58□□□□□ -0.24
COL27A1-203ENST00000468565 FLNCQ14315 2725 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 GOLGA8QA0A0J9YX86 632 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 CLEC18AA5D8T8 446 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 GOLGA8OA6NCC3 632 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 GOLGA8NF8WBI6 632 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 PSMD12O00232 456 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 ERI3O43414 337 aaKnown RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 SESN3P58005 492 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 BTN3A2P78410 334 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 LSM12Q3MHD2 195 aaKnown RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 SFT2D3Q587I9 215 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 PAPD4Q6PIY7 484 aaKnown RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 CLEC18BQ6UXF7 455 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 SLC22A9Q8IVM8 553 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 KIRREL3Q8IZU9 778 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 CLEC18CQ8NCF0 446 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 M1APQ8TC57 530 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 ACTRT2Q8TDY3 377 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 ADAMTS18Q8TE60 1221 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 TSLPQ969D9 159 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 CLPTM1LQ96KA5 538 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 LPAR4Q99677 370 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 REXO4Q9GZR2 422 aaKnown RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 ASH1LQ9NR48 2969 aaKnown RBP13.57□□□□□ -0.24
COL27A1-203ENST00000468565 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
COL27A1-203ENST00000468565 DYTNA2CJ06 578 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 B4GALT2O60909 372 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 FKBP6O75344 327 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 EPB42P16452 691 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 CLNS1AP54105 237 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 ARG2P78540 354 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 BTBD16Q32M84 506 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 H3F3CQ6NXT2 135 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 METTL2BQ6P1Q9 378 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 TRIM40Q6P9F5 258 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 LRRC74BQ6ZQY2 392 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 MYLK4Q86YV6 388 aaPredicted RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 LAS2Q8IYD9 372 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 CPSF7Q8N684 471 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 HAS2Q92819 552 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 QRFPRQ96P65 431 aa13.56□□□□□ -0.24
COL27A1-203ENST00000468565 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
COL27A1-203ENST00000468565 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms