RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 LIM2P55344 173 aa15.03■□□□□ -0
TSPAN4-211ENST00000468468 RPS26P62854 115 aaKnown RBP15.03■□□□□ -0
TSPAN4-211ENST00000468468 ZNF658BQ4V348 819 aaPredicted RBP15.03■□□□□ -0
TSPAN4-211ENST00000468468 ZNF770Q6IQ21 691 aaPredicted RBP15.03■□□□□ -0
TSPAN4-211ENST00000468468 UNC5DQ6UXZ4 953 aa15.03■□□□□ -0
TSPAN4-211ENST00000468468 CEACAM20Q6UY09 585 aa15.03■□□□□ -0
TSPAN4-211ENST00000468468 TRAPPC5Q8IUR0 188 aa15.03■□□□□ -0
TSPAN4-211ENST00000468468 LINC01553A4QN01 128 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 ARRDC5A6NEK1 342 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 C5orf58C9J3I9 102 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 LOC110117498-PIK3R3F6TDL0 507 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 TLR4O00206 839 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 ENTPD6O75354 484 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 CHRNB1P11230 501 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 SYN1P17600 705 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 CEBPBP17676 345 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 ETV6P41212 452 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
TSPAN4-211ENST00000468468 SLC30A8Q8IWU4 369 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 ST13P5Q8NFI4 369 aaPredicted RBP15.02■□□□□ -0
TSPAN4-211ENST00000468468 PIK3R3Q92569 461 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 LRRC3BQ96PB8 259 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 CNPPD1Q9BV87 410 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 OR2AG1Q9H205 316 aa15.02■□□□□ -0
TSPAN4-211ENST00000468468 EXOSC4Q9NPD3 245 aaKnown RBP15.02■□□□□ -0
TSPAN4-211ENST00000468468 MN1Q10571 1320 aaPredicted RBP15.02■□□□□ -0
TSPAN4-211ENST00000468468 SNX4O95219 450 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 APOA1P02647 267 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 FEN1P39748 380 aaKnown RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 CASP3P42574 277 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 SLC15A1P46059 708 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 ERAP2Q6P179 960 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 TNFAIP8L2Q6P589 184 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 SPATC1Q76KD6 591 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 OPALINQ96PE5 141 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 TRNT1Q96Q11 434 aaKnown RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 CCDC177Q9NQR7 707 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 C14orf119Q9NWQ9 140 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 ERVK13-1Q9NX77 482 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 KCND3Q9UK17 655 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 TMCC3Q9ULS5 477 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 PRELID1Q9Y255 219 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 GPSM3Q9Y4H4 160 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 RANBP2P49792 3224 aaKnown RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 PDZK1P1A8MUH7 402 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 SOX14O95416 240 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 BCHEP06276 602 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 CKMT1AP12532 417 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 LRRC56Q8IYG6 542 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 C2orf73Q8N5S3 287 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 HORMAD2Q8N7B1 307 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 CELF2-AS1Q8N7Q2 184 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 VN1R2Q8NFZ6 395 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 PDXPQ96GD0 296 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 SDHCQ99643 169 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 TAPBPLQ9BX59 468 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 UCK2Q9BZX2 261 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 TP63Q9H3D4 680 aaPredicted RBP15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 N6AMT1Q9Y5N5 214 aa15.02□□□□□ -0.01
TSPAN4-211ENST00000468468 DYRK3O43781 588 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 IGFBP1P08833 259 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ALDH9A1P49189 494 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 PARS2Q7L3T8 475 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 NRSN1Q8IZ57 195 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ANKK1Q8NFD2 765 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 HOXD1Q9GZZ0 328 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 EPHX3Q9H6B9 360 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 SLC25A19Q9HC21 320 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 DNAJC27Q9NZQ0 273 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 CRNNQ9UBG3 495 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ANKDD1BA6NHY2 528 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 FGF19O95750 216 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ADAP00813 363 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 PIPP12273 146 aaPredicted RBP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 OSMP13725 252 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 TCEAL5Q5H9L2 206 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 TMIGD1Q6UXZ0 262 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 RFPL4BQ6ZWI9 263 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 IKBIPQ70UQ0 350 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 VN1R5Q7Z5H4 357 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 MMAAQ8IVH4 418 aaKnown RBP15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 SLC34A3Q8N130 599 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 LILRB4Q8NHJ6 448 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 SLC38A5Q8WUX1 472 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 IL17FQ96PD4 163 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ASPNQ9BXN1 380 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 HHATLQ9HCP6 504 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 FBXL12Q9NXK8 326 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 TBC1D14Q9P2M4 693 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 REV1Q9UBZ9 1251 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 ICKQ9UPZ9 632 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 DSPPQ9NZW4 1301 aa15.01□□□□□ -0.01
TSPAN4-211ENST00000468468 K7ESM1 405 aa15□□□□□ -0.01
TSPAN4-211ENST00000468468 KPNA3O00505 521 aaPredicted RBP15□□□□□ -0.01
TSPAN4-211ENST00000468468 SSX4O60224 188 aa15□□□□□ -0.01
TSPAN4-211ENST00000468468 SH3BP5O60239 455 aa15□□□□□ -0.01
TSPAN4-211ENST00000468468 LILRB5O75023 590 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms