RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CAPGP40121 348 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CAPZBP47756 277 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 NCBP2P52298 156 aaKnown RBP eCLIP9.64□□□□□ -0.878e-6■■□□□ 13
MSH5-213ENST00000468136 ITGA1P56199 1179 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 ARF3P61204 181 aaPredicted RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 KCNC4Q03721 635 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 SLC14A1Q13336 389 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 IL18R1Q13478 541 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TCEA2Q15560 299 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 NRF1Q16656 503 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 C14orf28Q4W4Y0 310 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CYBRD1Q53TN4 286 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TMEM214Q6NUQ4 689 aaKnown RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 ZCCHC12Q6PEW1 402 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 UGT2A3Q6UWM9 527 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 ENPP6Q6UWR7 440 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CEACAM20Q6UY09 585 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 USP53Q70EK8 1073 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 RABEPKQ7Z6M1 372 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 WDR5BQ86VZ2 330 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CARM1Q86X55 608 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 RNF130Q86XS8 419 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 EPHX4Q8IUS5 362 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CHERPQ8IWX8 916 aaKnown RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 CLEC4FQ8N1N0 589 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CSNK1A1LQ8N752 337 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 C19orf47Q8N9M1 422 aaKnown RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 OR4K14Q8NGD5 310 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 NR4A3Q92570 626 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TANKQ92844 425 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 PMM1Q92871 262 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TMBIM1Q969X1 311 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 EXOSC8Q96B26 276 aaKnown RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 HSH2DQ96JZ2 352 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 SLC35G5Q96KT7 338 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 EPYCQ99645 322 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 SLC29A1Q99808 456 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 ADI1Q9BV57 179 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 BTBD2Q9BX70 525 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TRIM4Q9C037 500 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 FAM192AQ9GZU8 254 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 AICDAQ9GZX7 198 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 GLIPR2Q9H4G4 154 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 EVA1AQ9H8M9 152 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 REEP1Q9H902 201 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 BCL2L10Q9HD36 194 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 SIRT3Q9NTG7 399 aaPredicted RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 GPATCH2Q9NW75 528 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 C2orf42Q9NWW7 574 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 TEX10Q9NXF1 929 aaPredicted RBP9.64□□□□□ -0.87
MSH5-213ENST00000468136 PTGFRNQ9P2B2 879 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 RAPGEFL1Q9UHV5 662 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 DAPP1Q9UN19 280 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 ATG4BQ9Y4P1 393 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 PCDHGB3Q9Y5G1 929 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 SNX8Q9Y5X2 465 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 CDH23Q9H251 3354 aa9.64□□□□□ -0.87
MSH5-213ENST00000468136 A0A0J9YVX5 310 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 C7orf72A4D263 438 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 TLCD2A6NGC4 264 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 UPK1AO00322 258 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 PLOD2O00469 737 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 SOCS2O14508 198 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 EI24O14681 340 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 NUDT21O43809 227 aaKnown RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 CTSVO60911 334 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 PIAS2O75928 621 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 B3GALT4O96024 378 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ALPLP05186 524 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ZNF888P0CJ79 500 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 THRBP10828 461 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ETFAP13804 333 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ETS2P15036 469 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 CERS1P27544 350 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 HOXD12P35452 270 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ARRB1P49407 418 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 SMIM11AP58511 58 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 RAB8AP61006 207 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 GPLD1P80108 840 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 HSPB3Q12988 150 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 C1orf61Q13536 156 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 FAM53BQ14153 422 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 SLC36A3Q495N2 470 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 ZNF542PQ5EBM4 170 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 TMEM154Q6P9G4 183 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 FAM92BQ6ZTR7 304 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 Q7L0L9 218 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 STK32CQ86UX6 486 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 KMT5CQ86Y97 462 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 C10orf111Q8N326 155 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 LRRC25Q8N386 305 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 FAM160A2Q8N612 972 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 ZNF555Q8NEP9 628 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 MAFAQ8NHW3 353 aaPredicted RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 BBS10Q8TAM1 723 aa9.63□□□□□ -0.87
MSH5-213ENST00000468136 PNPT1Q8TCS8 783 aaKnown RBP9.63□□□□□ -0.87
MSH5-213ENST00000468136 ZNF285Q96NJ3 590 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms