RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 ACKR1Q16570 336 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 DCLRE1AQ6PJP8 1040 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 SIAH3Q8IW03 269 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 TBCKQ8TEA7 893 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 ZIM3Q96PE6 472 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 SIGLEC12Q96PQ1 595 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 MCCC1Q96RQ3 725 aaPredicted RBP3.23□□□□□ -1.89
RBM39-226ENST00000468086 RAB40CQ96S21 281 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 RANBP9Q96S59 729 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 CUEDC2Q9H467 287 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 SRD5A3Q9H8P0 318 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 ELL3Q9HB65 397 aaPredicted RBP3.23□□□□□ -1.89
RBM39-226ENST00000468086 TERF2IPQ9NYB0 399 aa3.23□□□□□ -1.89
RBM39-226ENST00000468086 ZNF646O15015 1829 aaPredicted RBP3.23□□□□□ -1.89
RBM39-226ENST00000468086 COL16A1Q07092 1604 aaPredicted RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 ACEP12821 1306 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 A0A087X0K7 114 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 FAM149AA5PLN7 773 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ST8SIA3O43173 380 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 FCGR3AP08637 254 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 GIG44P09565 113 aaPredicted RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 CCDC159P0C7I6 412 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 C8orf89P0DMQ9 161 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 GLRA1P23415 457 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ID1P41134 155 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 FRKP42685 505 aaPredicted RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 TNFRSF4P43489 277 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 RGRP47804 291 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 CAPRIN1Q14444 709 aaKnown RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 EMC2Q15006 297 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 SPHARQ15513 63 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ANKRD55Q3KP44 614 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 MPP7Q5T2T1 576 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 LRRC38Q5VT99 294 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 CGB2Q6NT52 195 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 KLHDC8AQ8IYD2 350 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ATAD1Q8NBU5 361 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ICA1LQ8NDH6 482 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 OR1K1Q8NGR3 316 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ESAMQ96AP7 390 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 C16orf58Q96GQ5 468 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 SSX3Q99909 188 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 THUMPD3Q9BV44 507 aaKnown RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 ZDHHC6Q9H6R6 413 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 TUFT1Q9NNX1 390 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 TMEM161AQ9NX61 479 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 CIDEBQ9UHD4 219 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 RSPH14Q9UHP6 348 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 LEF1Q9UJU2 399 aaPredicted RBP3.22□□□□□ -1.89
RBM39-226ENST00000468086 FBXL5Q9UKA1 691 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 IKZF3Q9UKT9 509 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 ERVK-19Q9WJR5 959 aa3.22□□□□□ -1.89
RBM39-226ENST00000468086 LRRTM2O43300 516 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ATP9AO75110 1047 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 CSO75390 466 aaKnown RBP3.21□□□□□ -1.9
RBM39-226ENST00000468086 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
RBM39-226ENST00000468086 MMP10P09238 476 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 HSD17B1P14061 328 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 FASP25445 335 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 GJB2P29033 226 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 FNTAP49354 379 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 IST1P53990 364 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 RBP5P82980 135 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 PTK6Q13882 451 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 NFE2L1Q14494 772 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ZNF789Q5FWF6 425 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 SIGLEC15Q6ZMC9 328 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 VSIG1Q86XK7 387 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 SLC34A3Q8N130 599 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 SLC22A18ASQ8N1D0 253 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ZNF525Q8N782 197 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 MR1Q95460 341 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ULK4Q96C45 1275 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 PHYHIPLQ96FC7 376 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 CDKN2AIPNLQ96HQ2 116 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 SPAG8Q99932 426 aaPredicted RBP3.21□□□□□ -1.9
RBM39-226ENST00000468086 PAXXQ9BUH6 204 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 TEX13BQ9BXU2 312 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 VNN3Q9NY84 501 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ADAM22Q9P0K1 906 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 Q9UF83 564 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 RNF24Q9Y225 148 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 FGD5Q6ZNL6 1462 aa3.21□□□□□ -1.9
RBM39-226ENST00000468086 ABCA7Q8IZY2 2146 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 PRRC2AP48634 2157 aaKnown RBP3.2□□□□□ -1.9
RBM39-226ENST00000468086 DUSP11O75319 330 aaKnown RBP3.2□□□□□ -1.9
RBM39-226ENST00000468086 GH1P01241 217 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 ZNF19P17023 458 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 OR1D2P34982 312 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 ERVPABLB-1P60509 514 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 RPL27P61353 136 aaKnown RBP3.2□□□□□ -1.9
RBM39-226ENST00000468086 BFSP1Q12934 665 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 RFTN1Q14699 578 aaPredicted RBP3.2□□□□□ -1.9
RBM39-226ENST00000468086 ZNF79Q15937 498 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 CNPY1Q3B7I2 92 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 WDR25Q64LD2 544 aaPredicted RBP3.2□□□□□ -1.9
RBM39-226ENST00000468086 PODNL1Q6PEZ8 512 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 CCDC197Q8NCU1 140 aa3.2□□□□□ -1.9
RBM39-226ENST00000468086 SPATA18Q8TC71 538 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms