RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 SCRN2Q96FV2 425 aa14.83□□□□□ -0.04
CHD1L-205ENST00000467213 PPP1R16AQ96I34 528 aa14.83□□□□□ -0.04
CHD1L-205ENST00000467213 DCLRE1CQ96SD1 692 aaKnown RBP14.83□□□□□ -0.04
CHD1L-205ENST00000467213 PCDHB7Q9Y5E2 793 aa14.83□□□□□ -0.04
CHD1L-205ENST00000467213 ZSCAN5BA6NJL1 495 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 FFAR1O14842 300 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ITPKAP23677 461 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 EVX1P49640 407 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ABATP80404 500 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ACSM1Q08AH1 577 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 RAB40BQ12829 278 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF385BQ569K4 471 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 HACD4Q5VWC8 232 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 USP30Q70CQ3 517 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 SLC51BQ86UW2 128 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 HUS1BQ8NHY5 278 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 C2orf49Q9BVC5 232 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 TRIM45Q9H8W5 580 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 SGK2Q9HBY8 427 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 A0A1W2PQ72 361 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 SNTNA6NMZ2 147 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 QSOX1O00391 747 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 NR2F6P10588 404 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ATP1B2P14415 290 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ELAVL4P26378 380 aaKnown RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 GAS1P54826 345 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 HOXC5Q00444 222 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 BTBD16Q32M84 506 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 HSD17B12Q53GQ0 312 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ZBTB37Q5TC79 503 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 LIPKQ5VXJ0 399 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 MRGPREQ86SM8 312 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 FAM217AQ8IXS0 508 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 Q8N402 240 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 OR7G3Q8NG95 312 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 AKAP1Q92667 903 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ZBED6CLQ96FA7 236 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF717Q9BY31 904 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 ELF5Q9UKW6 265 aaPredicted RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 EXOSC1Q9Y3B2 195 aaKnown RBP14.82□□□□□ -0.04
CHD1L-205ENST00000467213 CDH10Q9Y6N8 788 aa14.82□□□□□ -0.04
CHD1L-205ENST00000467213 A0A1W2PQ67 120 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 SLC19A2O60779 497 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 TBX19O60806 448 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 CYP2A6P11509 494 aaPredicted RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 POU2F1P14859 743 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ARSBP15848 533 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 SERPINA4P29622 427 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ZXDBP98169 803 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 PUM1Q14671 1186 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 CDONQ4KMG0 1287 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 DCST1Q5T197 706 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 MZT2AQ6P582 158 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 CAMKK1Q8N5S9 505 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ATP6V1C2Q8NEY4 427 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ACOT12Q8WYK0 555 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 QRFPRQ96P65 431 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 MTERF1Q99551 399 aaKnown RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 PIGUQ9H490 435 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 GPSM3Q9Y4H4 160 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 E7EQ34 232 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 RFPL3O75679 317 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ETHE1O95571 254 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 IGSF6O95976 241 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 TP53P04637 393 aaPredicted RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 UQCRC2P22695 453 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 TUFMP49411 452 aaKnown RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 DGKGP49619 791 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 DAB2P98082 770 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ATP13A5Q4VNC0 1218 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 FAM71E1Q6IPT2 247 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 CEACAM20Q6UY09 585 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ZNF852Q6ZMS4 543 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ANKS3Q6ZW76 656 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 C16orf59Q7L2K0 433 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 C9orf62Q8N4C0 152 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ASZ1Q8WWH4 475 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 ABCG8Q9H221 673 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 AFF4Q9UHB7 1163 aaKnown RBP14.81□□□□□ -0.04
CHD1L-205ENST00000467213 POLHQ9Y253 713 aa14.81□□□□□ -0.04
CHD1L-205ENST00000467213 FAM240BA0A1B0GVZ2 78 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 PDPK1O15530 556 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 SGTAO43765 313 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 C6orf47O95873 294 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 LIM2P55344 173 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 DSTNP60981 165 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 DUSP4Q13115 394 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 CCL14Q16627 93 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 WSCD2Q2TBF2 565 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 PGBD2Q6P3X8 592 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 TMEM107Q6UX40 140 aa14.8□□□□□ -0.04
CHD1L-205ENST00000467213 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms