RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FOLH1Q04609 750 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 SLC13A2Q13183 592 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ERV3-1Q14264 604 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 DPY19L1Q2PZI1 675 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 TMEM198Q66K66 360 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CPZQ66K79 652 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PIGWQ7Z7B1 504 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PROSER1Q86XN7 944 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 NATD1Q8N6N6 113 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 GLB1L3Q8NCI6 653 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ADAMTS17Q8TE56 1095 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 TESCQ96BS2 214 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 RILPQ96NA2 401 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PTCHD1Q96NR3 888 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CNTNAP3BQ96NU0 1288 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 IP6K3Q96PC2 410 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CCNL2Q96S94 520 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 PELOQ9BRX2 385 aaKnown RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 CNTNAP3Q9BZ76 1288 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF385DQ9H6B1 395 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 MIEF1Q9NQG6 463 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ZIM2Q9NZV7 527 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 C19orf25Q9UFG5 118 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-205ENST00000466897 IL17BQ9UHF5 180 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 BAIAP2L1Q9UHR4 511 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 ACACAQ13085 2346 aa14.26□□□□□ -0.13
NPHP4-205ENST00000466897 APC2O95996 2303 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 KLK10O43240 276 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 FGF17O60258 216 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 C8orf89P0DMQ9 161 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 PIK3R1P27986 724 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 GALNSP34059 522 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 ALDH9A1P49189 494 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 STX1BP61266 288 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
NPHP4-205ENST00000466897 BTG2P78543 158 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 ACTN3Q08043 901 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-205ENST00000466897 SQLEQ14534 574 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 NSDHLQ15738 373 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 UGT8Q16880 541 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 MFSD4BQ5TF39 518 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 SHISA6Q6ZSJ9 500 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 VASH2Q86V25 355 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 PRSS58Q8IYP2 241 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 MMP21Q8N119 569 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 KDF1Q8NAX2 398 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-205ENST00000466897 OR4K14Q8NGD5 310 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 CDC26Q8NHZ8 85 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 METTL21AQ8WXB1 218 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 VPS50Q96JG6 964 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF681Q96N22 645 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 PRPF18Q99633 342 aaKnown RBP14.25□□□□□ -0.13
NPHP4-205ENST00000466897 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
NPHP4-205ENST00000466897 DPY30Q9C005 99 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 RABEP2Q9H5N1 569 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 CLMPQ9H6B4 373 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 NECTIN3Q9NQS3 549 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 ATAD3AQ9NVI7 634 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 UTS2RQ9UKP6 389 aa14.25□□□□□ -0.13
NPHP4-205ENST00000466897 A0A087WV48 116 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 GLOD5A6NK44 160 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF891A8MT65 544 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 TGFBR3LH3BV60 316 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 LDB3O75112 727 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 SLC35E2P0CK97 266 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 CSNK2A2P19784 350 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 MAOAP21397 527 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 FRKP42685 505 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 UCNP55089 124 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 PLIN5Q00G26 463 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 STX4Q12846 297 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 IL10RAQ13651 578 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 RPS6KA2Q15349 733 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 TERF2Q15554 542 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 PPP1R32Q7Z5V6 425 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ANKRD37Q7Z713 158 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 TICAM1Q8IUC6 712 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 SPACA3Q8IXA5 215 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ST13P4Q8IZP2 240 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 MIER2Q8N344 545 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 CPSF7Q8N684 471 aaKnown RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 OR8J2Q8NGG1 315 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 CLHC1Q8NHS4 586 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ZCCHC14Q8WYQ9 949 aaKnown RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 UCN3Q969E3 161 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 PPCDCQ96CD2 204 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 KLHL29Q96CT2 875 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 COQ8BQ96D53 544 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 CNRIP1Q96F85 164 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 CCT8L2Q96SF2 557 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 FAM107BQ9H098 131 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ADAP2Q9NPF8 381 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 SLC35C2Q9NQQ7 365 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 GIMAP4Q9NUV9 329 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 HS3ST3B1Q9Y662 390 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 MRPS18BQ9Y676 258 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms