RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 DLG1Q12959 904 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 GTF2H2Q13888 395 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 SETDB1Q15047 1291 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 ACAP2Q15057 778 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 CPSF6Q16630 551 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 CMPK2Q5EBM0 449 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 DEPDC1Q5TB30 811 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 LIPJQ5W064 366 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 GTF2H2CQ6P1K8 395 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 OR52N2Q8NGI0 321 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 OR8K3Q8NH51 312 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 RHEBL1Q8TAI7 183 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 ASB5Q8WWX0 329 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 RND1Q92730 232 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 TANKQ92844 425 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 SGCZQ96LD1 299 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 PELOQ9BRX2 385 aaKnown RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 TTTY12Q9BZ98 90 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 DMRT3Q9NQL9 472 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 LYARQ9NX58 379 aaKnown RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 MYO9AB2RTY4 2548 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 CENPEQ02224 2701 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 CCDC189A1A4V9 331 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 NPIPA2E9PIF3 369 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 NPIPA3F8WFD2 350 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-206ENST00000466591 ALOX15P16050 662 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-206ENST00000466591 CNR1P21554 472 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 KCNJ2P63252 427 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 GUCY2DQ02846 1103 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 FOLH1Q04609 750 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 TRADDQ15628 312 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 ZDHHC24Q6UX98 284 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 UBE3DQ7Z6J8 389 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 RNF175Q8N4F7 328 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF321PQ8N8H1 164 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 GOLM1Q8NBJ4 401 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 FAM13CQ8NE31 585 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 OR10Q1Q8NGQ4 319 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 PPWD1Q96BP3 646 aaKnown RBP16.24■□□□□ 0.19
COL7A1-206ENST00000466591 IPPKQ9H8X2 491 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 CLDN16Q9Y5I7 305 aa16.24■□□□□ 0.19
COL7A1-206ENST00000466591 FIGNL2A6NMB9 653 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 FGF17O60258 216 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 SMIM24O75264 130 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 KLHL2O95198 593 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ETHE1O95571 254 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 NR2F6P10588 404 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 HLA-DQA1Q5Y7H0 255 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF585AQ6P3V2 769 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 MEX3BQ6ZN04 569 aaKnown RBP16.23■□□□□ 0.19
COL7A1-206ENST00000466591 RNF111Q6ZNA4 994 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ACAD11Q709F0 780 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 NUDT13Q86X67 352 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 FAM109AQ8N4B1 249 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF592Q92610 1267 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 RIT1Q92963 219 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 SENP5Q96HI0 755 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-206ENST00000466591 JSRP1Q96MG2 331 aaPredicted RBP16.23■□□□□ 0.19
COL7A1-206ENST00000466591 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ITGB1BP2Q9UKP3 347 aa16.23■□□□□ 0.19
COL7A1-206ENST00000466591 ATP6AP2A0A1C7CYW4 349 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 PLPP1O14494 284 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 BCKDKO14874 412 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 UGDHO60701 494 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ATP6AP2O75787 350 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 SCELO95171 688 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 CLDN9O95484 217 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 C1QAP02745 245 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 CHRNB4P30926 498 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 DNASE1L1P49184 302 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 CCNG1P51959 295 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 HERVK_113P63132 956 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ERVK-8P63133 956 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF267Q14586 743 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 SLC22A10Q63ZE4 541 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 C18orf63Q68DL7 685 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 GOLGA7Q7Z5G4 137 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 FGD2Q7Z6J4 655 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 CENPLQ8N0S6 344 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ZCCHC7Q8N3Z6 543 aaKnown RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 PTGR2Q8N8N7 351 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 OR5M9Q8NGP3 310 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ANKRD9Q96BM1 317 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 LURAP1Q96LR2 239 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 DMRTA2Q96SC8 542 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ERVK-6Q9BXR3 956 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 IL1RL2Q9HB29 575 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 KCNJ16Q9NPI9 418 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 DEPPQ9NTK1 212 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ALKBH4Q9NXW9 302 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ACAD8Q9UKU7 415 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 TMCO1Q9UM00 188 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 BOKQ9UMX3 212 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-206ENST00000466591 ERVK-19Q9WJR5 959 aa16.22■□□□□ 0.19
COL7A1-206ENST00000466591 PINLYPA6NC86 204 aa16.21■□□□□ 0.19
COL7A1-206ENST00000466591 GLOD5A6NK44 160 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms