RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CES1P1Q9UKY3 287 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 CORO2BQ9UQ03 480 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 LOXL2Q9Y4K0 774 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PCDHB14Q9Y5E9 798 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 CABIN1Q9Y6J0 2220 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MYO1GB0I1T2 1018 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CYR61O00622 381 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CLDN4O14493 209 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 DNAJA2O60884 412 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 B4GALT2O60909 372 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CPNE3O75131 537 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 CSO75390 466 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 FHP07954 510 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 ZCCHC18P0CG32 403 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 C8orf89P0DMQ9 161 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 FGF5P12034 268 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MPIP34949 423 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 FEN1P39748 380 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 FRKP42685 505 aaPredicted RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 XCR1P46094 333 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 OR1D4P47884 311 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 LIMK1P53667 647 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 PCBP4P57723 403 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 EEFSECP57772 596 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 HBA1P69905 142 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MC2RQ01718 297 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SLC13A2Q13183 592 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 DSG2Q14126 1118 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MLC1Q15049 377 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SYT16Q17RD7 645 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 PRSS53Q2L4Q9 553 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 PIGGQ5H8A4 983 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 RABL3Q5HYI8 236 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MFSD4BQ5TF39 518 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SZRD1Q7Z422 152 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 GLRX5Q86SX6 157 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 RNF148Q8N7C7 305 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 OR51Q1Q8NH59 317 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 GOT1L1Q8NHS2 421 aaPredicted RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 UTP4Q969X6 686 aaKnown RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 TBC1D20Q96BZ9 403 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 AMDHD1Q96NU7 426 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CTRCQ99895 268 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 KCTD14Q9BQ13 255 aaPredicted RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CPPED1Q9BRF8 314 aaPredicted RBP11.43□□□□□ -0.58
VPS16-206ENST00000466415 SLC35A5Q9BS91 424 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 GLIPR2Q9H4G4 154 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 RAD21L1Q9H4I0 556 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 PRTFDC1Q9NRG1 225 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SEMA3GQ9NS98 782 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 CMTM6Q9NX76 183 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 SLC25A37Q9NYZ2 338 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 ABCD2Q9UBJ2 740 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 MAP4K5Q9Y4K4 846 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 PCDHB3Q9Y5E6 796 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 DNAH14Q0VDD8 3507 aa11.43□□□□□ -0.58
VPS16-206ENST00000466415 TRBV5-3A0A0A0MS03 114 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 B4E171 279 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 FAM227AF5H4B4 570 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 NME4O00746 187 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 OR10H2O60403 315 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 LDB3O75112 727 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 CDC123O75794 336 aaPredicted RBP11.42□□□□□ -0.58
VPS16-206ENST00000466415 KRT75O95678 551 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 MT-CO3P00414 261 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 JMJD7P0C870 316 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 PORP16435 677 aaPredicted RBP11.42□□□□□ -0.58
VPS16-206ENST00000466415 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
VPS16-206ENST00000466415 UQCRC2P22695 453 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 TSPAN7P41732 249 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 GCGRP47871 477 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 CDK9P50750 372 aaKnown RBP11.42□□□□□ -0.58
VPS16-206ENST00000466415 XKP51811 444 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 RAB15P59190 212 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 ID2Q02363 134 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 FOLH1Q04609 750 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 LIPEQ05469 1076 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 STX4Q12846 297 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 GAB1Q13480 694 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 SELPLGQ14242 412 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 SPATS1Q496A3 300 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS16-206ENST00000466415 HES3Q5TGS1 186 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 PWWP2BQ6NUJ5 590 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 DHRS13Q6UX07 377 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 CEACAM20Q6UY09 585 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 ASCL5Q7RTU5 278 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 ZNF551Q7Z340 670 aaPredicted RBP11.42□□□□□ -0.58
VPS16-206ENST00000466415 IFNEQ86WN2 208 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 HPS6Q86YV9 775 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 OR4N5Q8IXE1 308 aa11.42□□□□□ -0.58
VPS16-206ENST00000466415 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms