RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 C11orf24Q96F05 449 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TUBB1Q9H4B7 451 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 MMP25Q9NPA2 562 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 ADAP2Q9NPF8 381 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 SIRT5Q9NXA8 310 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 TEX10Q9NXF1 929 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 CCL27Q9Y4X3 112 aa13.58□□□□□ -0.24
SQSTM1-205ENST00000464493 GNG14A0A1W2PPG7 69 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 PGRMC2O15173 223 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 LYPLA1O75608 230 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 SASH3O75995 380 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 RSL1D1O76021 490 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 SNUPNO95149 360 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 GPR75O95800 540 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 LINC00032P0C843 101 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 TNNI3P19429 210 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 TIA1P31483 386 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■□□□ 14.2
SQSTM1-205ENST00000464493 SLC1A6P48664 564 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 IGLV3-21P80748 117 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 STX3Q13277 289 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 TERF2Q15554 542 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 ELAVL1Q15717 326 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 CRB2Q5IJ48 1285 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 OR52E8Q6IFG1 317 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 GALNT18Q6P9A2 607 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 Q6ZSR9 355 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 HPS6Q86YV9 775 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 TMEM132CQ8N3T6 1108 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 SIRT6Q8N6T7 355 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 NFAM1Q8NET5 270 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 DNAJB14Q8TBM8 379 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 METTL2AQ96IZ6 378 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 FAIM2Q9BWQ8 316 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 KCNK13Q9HB14 408 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 PTGFRNQ9P2B2 879 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 PCDHA9Q9Y5H5 950 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 PTGDR2Q9Y5Y4 395 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 CLCA3PQ9Y6N3 262 aa13.57□□□□□ -0.24
SQSTM1-205ENST00000464493 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 UQCRHLA0A096LP55 91 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 C1orf226A1L170 272 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 A8MUI8 341 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 NPIPB8E9PQR5 432 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 SEC22BO75396 215 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 UQCRHP07919 91 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 ANXA4P09525 319 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 PRPH2P23942 346 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 STT3AP46977 705 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 TAS2R50P59544 299 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 IGFL3Q6UXB1 125 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 ISLR2Q6UXK2 745 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 DDIASQ8IXT1 998 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 B3GNT7Q8NFL0 401 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 ELP5Q8TE02 316 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 PTPMT1Q8WUK0 201 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 TM9SF4Q92544 642 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 DAZLQ92904 295 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 RBM18Q96H35 190 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 DGAT2Q96PD7 388 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 LMF1Q96S06 567 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 ZBTB20Q9HC78 741 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 C1orf109Q9NX04 203 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 SPTA1P02549 2419 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 CFAP46Q8IYW2 2715 aa13.56□□□□□ -0.24
SQSTM1-205ENST00000464493 HMGB1P1B2RPK0 211 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 C17orf105B2RV13 164 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PIP5K1BO14986 540 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 DPM1O60762 260 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 C1QL1O75973 258 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 COX7A2P14406 83 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PIK3R1P27986 724 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 SOX11P35716 441 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 GSTM5P46439 218 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 GPR143P51810 404 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PLIN5Q00G26 463 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 BST1Q10588 318 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 KIAA0040Q15053 153 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 NR6A1Q15406 480 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 B3GNTL1Q67FW5 361 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 NOXRED1Q6NXP6 359 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 H3F3CQ6NXT2 135 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 LINC00696Q6ZRV3 163 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 TRIM42Q8IWZ5 723 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 ST13P4Q8IZP2 240 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 MORN4Q8NDC4 146 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 OR4K14Q8NGD5 310 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 OR2T11Q8NH01 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms