RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 WSCD2Q2TBF2 565 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PRAMEF7Q5VXH5 474 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 NEPROQ6NW34 567 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CASC1Q6TDU7 716 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 METTL7BQ6UX53 244 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF497Q6ZNH5 498 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 Q6ZRG5 221 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 MCM10Q7L590 875 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 KCNMB4Q86W47 210 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FAM131BQ86XD5 332 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PARP8Q8N3A8 854 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 GVQW1Q8N7I0 195 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ICA1LQ8NDH6 482 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PRSS33Q8NF86 280 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 TMEM185AQ8NFB2 350 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 NEK11Q8NG66 645 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 OR8H1Q8NGG4 311 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ESAMQ96AP7 390 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 C18orf12Q96KH6 178 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 RUNDC3BQ96NL0 473 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ANKRD27Q96NW4 1050 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 IWS1Q96ST2 819 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PKP2Q99959 881 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 LRRC61Q9BV99 259 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FUNDC2Q9BWH2 189 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 MOB1AQ9H8S9 216 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 IL1RAPQ9NPH3 570 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 GDF3Q9NR23 364 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FAM212BQ9NTI7 297 aaPredicted RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 TECRQ9NZ01 308 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 MUTYHQ9UIF7 546 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 DCAF1Q9Y4B6 1507 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 DHX29Q7Z478 1369 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 IGKV3D-15A0A087WSY6 115 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 RNF103-CHMP3A0A140T963 221 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CCDC69A6NI79 296 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 YJEFN3A6XGL0 299 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 FBP2O00757 339 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SNAP91O60641 907 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SEC22BO75396 215 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 TXNDC12O95881 172 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC4A1P02730 911 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ALPPP05187 535 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 APRTP07741 180 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF883P0CG24 379 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ALPPL2P10696 532 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 MBL2P11226 248 aaPredicted RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SELEP16581 610 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF10P21506 573 aaPredicted RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 IL10P22301 178 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CALRP27797 417 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SFNP31947 248 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 TNFRSF4P43489 277 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC12A3P55017 1021 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 YBEYP58557 167 aaPredicted RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 STARD6P59095 220 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 RPL27P61353 136 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ELAVL2Q12926 359 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 RIGQ13278 110 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 EXOSC7Q15024 291 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF146Q15072 292 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 FCN2Q15485 313 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 C14orf177Q52M58 125 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 MUC21Q5SSG8 566 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 DCAF12Q5T6F0 453 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 HIST2H2AA3Q6FI13 130 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CDC42EP5Q6NZY7 148 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 TATDN1Q6P1N9 297 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CNSTQ6PJW8 725 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 DOK6Q6PKX4 331 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CDHR3Q6ZTQ4 885 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 STXBP4Q6ZWJ1 553 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CARM1Q86X55 608 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CATSPER3Q86XQ3 398 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 RNF130Q86XS8 419 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 WDR49Q8IV35 697 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CCNYQ8ND76 341 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 NPRL2Q8WTW4 380 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF689Q96CS4 500 aaPredicted RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 RAB39BQ96DA2 213 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 MRPL53Q96EL3 112 aaKnown RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 GPR137Q96N19 417 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 SPATA13Q96N96 652 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF599Q96NL3 588 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 TNFRSF13CQ96RJ3 184 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ATF6BQ99941 703 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 DCTN5Q9BTE1 182 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 TRIM15Q9C019 465 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 DPEP3Q9H4B8 488 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 WDR41Q9HAD4 459 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 HOMER3Q9NSC5 361 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 VPS54Q9P1Q0 977 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 THAP10Q9P2Z0 257 aaPredicted RBP3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ERVK-18Q9QC07 812 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 COPS7AQ9UBW8 275 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 KCNN3Q9UGI6 736 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 CCPG1Q9ULG6 757 aa3.05□□□□□ -1.92
HMGXB4-205ENST00000464480 ODF2LQ9ULJ1 636 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms