RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ITPRIPL1Q6GPH6 555 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 YRDCQ86U90 279 aaKnown RBP12.04□□□□□ -0.48
C9orf3-211ENST00000463372 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 SCUBE1Q8IWY4 988 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 OR14A16Q8NHC5 309 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF480Q8WV37 535 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 DIO2Q92813 273 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 RUNDC3BQ96NL0 473 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 PKP4Q99569 1192 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 GORASP1Q9BQQ3 440 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 ISCUQ9H1K1 167 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 PRTFDC1Q9NRG1 225 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 DTX4Q9Y2E6 619 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 PTGDR2Q9Y5Y4 395 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 TENM3Q9P273 2699 aa12.04□□□□□ -0.48
C9orf3-211ENST00000463372 EPPK1P58107 5090 aaKnown RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 EMC8O43402 210 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 NRDCO43847 1150 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 CGAP01215 116 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 SERPIND1P05546 499 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 SERPINB3P29508 390 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 HSD17B7P56937 341 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 HILS1P60008 231 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 FGFBP1Q14512 234 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 DENND5AQ6IQ26 1287 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 RINLQ6ZS11 566 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF571Q7Z3V5 609 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 SLC15A4Q8N697 577 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF321PQ8N8H1 164 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 MFSD9Q8NBP5 474 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 FAM83FQ8NEG4 500 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 KBTBD8Q8NFY9 601 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 ASB11Q8WXH4 323 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 G6PC3Q9BUM1 346 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 FANCFQ9NPI8 374 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 COPS7AQ9UBW8 275 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
C9orf3-211ENST00000463372 PTBP2Q9UKA9 531 aaKnown RBP12.03□□□□□ -0.48
C9orf3-211ENST00000463372 UQCRHLA0A096LP55 91 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 ANKRD33BA6NCL7 494 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 SYNDIG1LA6NDD5 238 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 CDC7O00311 574 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 PLOD2O00469 737 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 SNX4O95219 450 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 TNNI3P19429 210 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 PTNP21246 168 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 FMO4P31512 558 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 RGS1Q08116 209 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 PWP1Q13610 501 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 POU6F1Q14863 301 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 CYP1B1Q16678 543 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 KBTBD12Q3ZCT8 623 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 ODF2Q5BJF6 829 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 NCMAPQ5T1S8 102 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 SBSNQ6UWP8 590 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 DEF8Q6ZN54 512 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 CHMP1BQ7LBR1 199 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 RILPQ96NA2 401 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 PIMREGQ9BSJ6 248 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 ACTR6Q9GZN1 396 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 ARNT2Q9HBZ2 717 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 NGBQ9NPG2 151 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 RNF112Q9ULX5 631 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 DLGAP4Q9Y2H0 992 aa12.02□□□□□ -0.49
C9orf3-211ENST00000463372 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SLC22A20A6NK97 555 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SMAD9O15198 467 aaKnown RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SHOX2O60902 331 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 PROSCO94903 275 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SYF2O95926 243 aaKnown RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 CATP04040 527 aaKnown RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 CCZ1BP86790 482 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 CCZ1P86791 482 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 USP43Q70EL4 1123 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 CILP2Q8IUL8 1156 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 CA13Q8N1Q1 262 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 SLC2A12Q8TD20 617 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 PTPMT1Q8WUK0 201 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 RHBDF1Q96CC6 855 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 TRIM2Q9C040 744 aa12.01□□□□□ -0.49
C9orf3-211ENST00000463372 ING1Q9UK53 422 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-211ENST00000463372 TP53I11O14683 189 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 PRMT5O14744 637 aaPredicted RBP12□□□□□ -0.49
C9orf3-211ENST00000463372 HCRTR2O43614 444 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 PSIP1O75475 530 aaKnown RBP12□□□□□ -0.49
C9orf3-211ENST00000463372 FBXO45P0C2W1 286 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 PCMT1P22061 227 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 PSMB4P28070 264 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 MSH2P43246 934 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 NR4A2P43354 598 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 RAB8AP61006 207 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 FUT7Q11130 342 aa12□□□□□ -0.49
C9orf3-211ENST00000463372 KRT31Q15323 416 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms