RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 THUMPD1Q9NXG2 353 aaKnown RBP12.13□□□□□ -0.47
VAPB-203ENST00000463370 PDP1Q9P0J1 537 aaPredicted RBP12.13□□□□□ -0.47
VAPB-203ENST00000463370 CES1P1Q9UKY3 287 aa12.13□□□□□ -0.47
VAPB-203ENST00000463370 PADI2Q9Y2J8 665 aa12.13□□□□□ -0.47
VAPB-203ENST00000463370 ZNF451Q9Y4E5 1061 aa12.13□□□□□ -0.47
VAPB-203ENST00000463370 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 NME6O75414 186 aaPredicted RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 CYP4B1P13584 511 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 IL7RP16871 459 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 HOXB6P17509 224 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 IGFBP5P24593 272 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 GSTM2P28161 218 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 EPHA2P29317 976 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 RRM2P31350 389 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 DNAJA1P31689 397 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 DUSP7Q16829 419 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 CRB2Q5IJ48 1285 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 ASPGQ86U10 573 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 CCDC116Q8IYX3 515 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 TBC1D19Q8N5T2 526 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 ZFP28Q8NHY6 868 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 ZCCHC10Q8TBK6 192 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 IFT80Q9P2H3 777 aaPredicted RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 BAG5Q9UL15 447 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 TESMINQ9Y4I5 508 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 GON4LQ3T8J9 2241 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 LOC100130705A0A1B0GUX0 176 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 PROM1O43490 865 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 C9P02748 559 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 WNT1P04628 370 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 FPR1P21462 350 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 MAOBP27338 520 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 GSTM5P46439 218 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 NR1H2P55055 460 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 RPS15AP62244 130 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 CTU2Q2VPK5 515 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 LAIR2Q6ISS4 152 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 SLC22A18Q96BI1 424 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 TMEM19Q96HH6 336 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 RDH12Q96NR8 316 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 FAIM2Q9BWQ8 316 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 EHD3Q9NZN3 535 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 SH3GLB1Q9Y371 365 aa12.12□□□□□ -0.47
VAPB-203ENST00000463370 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
VAPB-203ENST00000463370 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TNFSF14O43557 240 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 HCRTR1O43613 425 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TFPTP0C1Z6 253 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 GPC1P35052 558 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 STXBP1P61764 594 aaKnown RBP12.11□□□□□ -0.47
VAPB-203ENST00000463370 BIRC2Q13490 618 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
VAPB-203ENST00000463370 MEP1AQ16819 746 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 FIGLAQ6QHK4 219 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TMEFF1Q8IYR6 380 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 OR52J3Q8NH60 311 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 KLHL6Q8WZ60 621 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 BBS4Q96RK4 519 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 YIPF4Q9BSR8 244 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 GSDMCQ9BYG8 508 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 RUBCNLQ9H714 662 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 REEP1Q9H902 201 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 AASSQ9UDR5 926 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 DMTF1Q9Y222 760 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 LRP4O75096 1905 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 SMIM31A0A1B0GVY4 71 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 H3BSA7 217 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PEX19P40855 299 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PRKAG1P54619 331 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 FOXD4Q12950 439 aaPredicted RBP12.11□□□□□ -0.47
VAPB-203ENST00000463370 MLC1Q15049 377 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 SYPL1Q16563 259 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 DEFB134Q4QY38 66 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 IFI44LQ53G44 452 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PTCRAQ6ISU1 281 aaPredicted RBP12.11□□□□□ -0.47
VAPB-203ENST00000463370 REEP3Q6NUK4 255 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 SLC48A1Q6P1K1 146 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 Q7L0L9 218 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PRSS41Q7RTY9 318 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 THAP5Q7Z6K1 395 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 NATD1Q8N6N6 113 aa12.11□□□□□ -0.47
VAPB-203ENST00000463370 PIK3C3Q8NEB9 887 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms