RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 WDPCPO95876 746 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 TPP2P29144 1249 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 TRHRP34981 398 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 GPR143P51810 404 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 MAPK12P53778 367 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 GPALPP1Q8IXQ4 340 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 FAM76AQ8TAV0 307 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 CHTF18Q8WVB6 975 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 DGAT2Q96PD7 388 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 FARSBQ9NSD9 589 aaKnown RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 A8MUI8 341 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 FGF17O60258 216 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 PRAMEF2O60811 474 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 ZFAND5O76080 213 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 AIFM1O95831 613 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 MLF1P58340 268 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 SPRED3Q2MJR0 410 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 ST13P4Q8IZP2 240 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 PGM2Q96G03 612 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 UTP23Q9BRU9 249 aaKnown RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 FAIM2Q9BWQ8 316 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 STMN4Q9H169 189 aaPredicted RBP12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 AGPAT4Q9NRZ5 378 aa12.19□□□□□ -0.46
R3HDM1-213ENST00000463230 TRBV11-1A0A0K0K1C0 115 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 C1orf226A1L170 272 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 A8MUA0 341 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 NPIPB8E9PQR5 432 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TYROBPO43914 113 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 CRCPO75575 148 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 KLK1P06870 262 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 MYZAPP0CAP1 466 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 UROSP10746 265 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 FOLH1Q04609 750 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TNFAIP8L3Q5GJ75 292 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 C18orf63Q68DL7 685 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 GALNT18Q6P9A2 607 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 BEST3Q8N1M1 668 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 OR1N1Q8NGS0 311 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TCP10LQ8TDR4 215 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 PTPMT1Q8WUK0 201 aaPredicted RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 NCLNQ969V3 563 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 ACPTQ9BZG2 426 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.18□□□□□ -0.462e-12■■■■□ 22.8
R3HDM1-213ENST00000463230 EML4Q9HC35 981 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 COPS7AQ9UBW8 275 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 WBP11Q9Y2W2 641 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 COPG1Q9Y678 874 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 C17orf105B2RV13 164 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 CTIFO43310 598 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 LDB3O75112 727 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 DDAH2O95865 285 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 SLC35E2P0CK97 266 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TNNI3P19429 210 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 KCNC4Q03721 635 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TUBA3CQ13748 450 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TUBA3EQ6PEY2 450 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 MDS2Q8NDY4 140 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 OR5L2Q8NGL0 311 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 RBM18Q96H35 190 aaKnown RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 FAM111AQ96PZ2 611 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 NPAS2Q99743 824 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 GATA5Q9BWX5 397 aaPredicted RBP12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 TRIM4Q9C037 500 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 CDCP1Q9H5V8 836 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 PSME2Q9UL46 239 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 PCDHA9Q9Y5H5 950 aa12.18□□□□□ -0.46
R3HDM1-213ENST00000463230 GABRR3A8MPY1 467 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 TM9SF1O15321 606 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 RSL1D1O76021 490 aaKnown RBP12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 NEFHP12036 1026 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 PRPH2P23942 346 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 PIK3R1P27986 724 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 MLLT10P55197 1068 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 ACSM2AQ08AH3 577 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 CEP85LQ5SZL2 805 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 NDUFAF5Q5TEU4 345 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 ACSM2BQ68CK6 577 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 SAMD14Q8IZD0 417 aaPredicted RBP12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 KIF2BQ8N4N8 673 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 FBXL20Q96IG2 436 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 PKNOX2Q96KN3 472 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 ZIM3Q96PE6 472 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 PLA2G3Q9NZ20 509 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 SLC17A7Q9P2U7 560 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 CSAG2Q9Y5P2 127 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 VPS4BO75351 444 aa12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 SNUPNO95149 360 aaKnown RBP12.17□□□□□ -0.46
R3HDM1-213ENST00000463230 CHEK2O96017 543 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms