RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 V9GYQ6 96 aa17.13■□□□□ 0.33
ATPAF2-202ENST00000462733 A0A0J9YVX5 310 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 G3V2T6 193 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 SLC30A4O14863 429 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 OR1F1O43749 312 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 LCMT2O60294 686 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 PRMT3O60678 531 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 CTSVO60911 334 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 SEC24DO94855 1032 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 ZBTB11O95625 1053 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 MT-ND1P03886 318 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 SPTBP11277 2137 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 PCNAP12004 261 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 HOXB9P17482 250 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 CXCR2P25025 360 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 S100A3P33764 101 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 CLDN6P56747 220 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 LAPTM5Q13571 262 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 E2F2Q14209 437 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 DPY19L1Q2PZI1 675 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 SGO1Q5FBB7 561 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 ADNP2Q6IQ32 1131 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 TMEM214Q6NUQ4 689 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 MED27Q6P2C8 311 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 TBPL2Q6SJ96 375 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 DHRS13Q6UX07 377 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 TMIGD1Q6UXZ0 262 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 PRSS42Q7Z5A4 293 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 B3GNT8Q7Z7M8 397 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 SLCO6A1Q86UG4 719 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 CLEC4FQ8N1N0 589 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 OR10A6Q8NH74 314 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 RBM4BQ9BQ04 359 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 RBM4Q9BWF3 364 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 OSBPL10Q9BXB5 764 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 CXorf21Q9HAI6 301 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 DCAF13Q9NV06 445 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 IFT80Q9P2H3 777 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 KLK4Q9Y5K2 254 aa17.12■□□□□ 0.33
ATPAF2-202ENST00000462733 TRIM64BA6NI03 449 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 BCL6P41182 706 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 MLLT3P42568 568 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 NOVA1P51513 510 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 GABARAPL2P60520 117 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 TUBA3CQ13748 450 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 DDX39BQ13838 428 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 DEFB110Q30KQ9 67 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 RFX4Q33E94 735 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 LRRC23Q53EV4 343 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 OTUD3Q5T2D3 398 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 FBXO42Q6P3S6 717 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 THAP5Q7Z6K1 395 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 STK32CQ86UX6 486 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 SLITRK4Q8IW52 837 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 EID3Q8N140 333 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 HDAC2Q92769 488 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 TCTN2Q96GX1 697 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 REXO5Q96IC2 774 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 FCRL1Q96LA6 429 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 ELOVL6Q9H5J4 265 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 POLR1BQ9H9Y6 1135 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 PDE7BQ9NP56 450 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 KIF26BQ2KJY2 2108 aa17.11■□□□□ 0.33
ATPAF2-202ENST00000462733 A0A1B0GVG6 124 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 TRBC2A0A5B9 178 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 PDYNP01213 254 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 SOX11P35716 441 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 NEK2P51955 445 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 CYP4F2P78329 520 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 PPP2R2BQ00005 443 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 ABHD18Q0P651 414 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 TOP3AQ13472 1001 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 IL18R1Q13478 541 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 KCNAB1Q14722 419 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 BROXQ5VW32 411 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 CROCCP3Q8IVE0 287 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 C8orf59Q8N0T1 100 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 CARFQ8N187 725 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 RNF175Q8N4F7 328 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 TBC1D19Q8N5T2 526 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 KRTCAP2Q8N6L1 136 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 ANKRD53Q8N9V6 530 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 OR7G3Q8NG95 312 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 OR5K1Q8NHB7 308 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 SELENOMQ8WWX9 145 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 TBC1D20Q96BZ9 403 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 FAM120BQ96EK7 910 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 MAGED4Q96JG8 741 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 ZNF768Q9H5H4 540 aaKnown RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 SERHLQ9NQF3 203 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 KNTC1P50748 2209 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 H0YIV9 168 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 TOX3O15405 576 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 HCRTR1O43613 425 aa17.1■□□□□ 0.33
ATPAF2-202ENST00000462733 NOL3O60936 208 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms