RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 GRTP1Q5TC63 336 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 KHDRBS2Q5VWX1 349 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 ZNF793Q6ZN11 406 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 C3orf62Q6ZUJ4 267 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SLC29A4Q7RTT9 530 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 MAATS1Q7Z4T9 603 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 MYLK4Q86YV6 388 aaPredicted RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 DND1Q8IYX4 353 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 SLC15A4Q8N697 577 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 NUBPLQ8TB37 319 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 TANKQ92844 425 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 RGMAQ96B86 450 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SENP5Q96HI0 755 aaPredicted RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 PELOQ9BRX2 385 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 MCMBPQ9BTE3 642 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 ALG9Q9H6U8 611 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 RPF2Q9H7B2 306 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 SMYD2Q9NRG4 433 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 B4GALT7Q9UBV7 327 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.23□□□□□ -0.13
SKA3-204ENST00000462482 PKDREJQ9NTG1 2253 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 PDZD2O15018 2839 aa14.23□□□□□ -0.13
SKA3-204ENST00000462482 IQANK1A0A1B0GTG1 560 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 TCRBV9S1A1TA0A576 114 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 K7EPI3 171 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 SAP18O00422 153 aaKnown RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 KLK8O60259 260 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 OR10H2O60403 315 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 PRAMEF4O60810 478 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 SCELO95171 688 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 WISP3O95389 354 aaPredicted RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 ETHE1O95571 254 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 GSTA2P09210 222 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 CCL3P10147 92 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 EPB42P16452 691 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 CRABP2P29373 138 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 BUD31P41223 144 aaPredicted RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 TFF3Q07654 80 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 CBLBQ13191 982 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 SLAMF1Q13291 335 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 DDX39BQ13838 428 aaKnown RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 SLMAPQ14BN4 828 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 HYAL4Q2M3T9 481 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 C1orf185Q5T7R7 199 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 PRAMEF9Q5VWM5 478 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 OR4C11Q6IEV9 310 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 CYS1Q717R9 158 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 UBE3DQ7Z6J8 389 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 GPR180Q86V85 440 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 OR4N5Q8IXE1 308 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 LAS2Q8IYD9 372 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 LIX1Q8N485 282 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 OR7G3Q8NG95 312 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 ZNF721Q8TF20 911 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 ANKRD9Q96BM1 317 aaPredicted RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 LRRC46Q96FV0 321 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 UBXN10Q96LJ8 280 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 DPH5Q9H2P9 285 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 WDR41Q9HAD4 459 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 TUBA8Q9NY65 449 aaPredicted RBP14.22□□□□□ -0.13
SKA3-204ENST00000462482 WHRNQ9P202 907 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 TNFRSF10DQ9UBN6 386 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 EDARQ9UNE0 448 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 ATG4BQ9Y4P1 393 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 LIPGQ9Y5X9 500 aa14.22□□□□□ -0.13
SKA3-204ENST00000462482 NCOA6Q14686 2063 aaPredicted RBP14.21□□□□□ -0.13
SKA3-204ENST00000462482 FAM187AA6NFU0 413 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 FAM159BA6NKW6 160 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 SYCE1LA8MT33 242 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 CXorf49A8MYA2 514 aaPredicted RBP14.21□□□□□ -0.13
SKA3-204ENST00000462482 FGF17O60258 216 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 GLI4P10075 376 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ALOX15P16050 662 aaPredicted RBP14.21□□□□□ -0.13
SKA3-204ENST00000462482 SERPINB3P29508 390 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 PIGAP37287 484 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ART1P52961 327 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ZKSCAN8Q15776 578 aaPredicted RBP14.21□□□□□ -0.13
SKA3-204ENST00000462482 SLC25A35Q3KQZ1 300 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 PPM1NQ8N819 430 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 FAM13CQ8NE31 585 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 REPS1Q96D71 796 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 SPACA9Q96E40 222 aaPredicted RBP14.21□□□□□ -0.13
SKA3-204ENST00000462482 FBXL20Q96IG2 436 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 GAL3ST4Q96RP7 486 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ERP44Q9BS26 406 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 CNPPD1Q9BV87 410 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 OR51B5Q9H339 312 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ZFP64Q9NPA5 681 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 CNIH4Q9P003 139 aa14.21□□□□□ -0.13
SKA3-204ENST00000462482 ANKRD17O75179 2603 aaKnown RBP14.21□□□□□ -0.14
SKA3-204ENST00000462482 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 CAPN14A8MX76 684 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 TP73O15350 636 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 KERAO60938 352 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 LTA4HP09960 611 aaKnown RBP14.2□□□□□ -0.14
SKA3-204ENST00000462482 EPORP19235 508 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 STX2P32856 288 aa14.2□□□□□ -0.14
SKA3-204ENST00000462482 PEX19P40855 299 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms