RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 A0A0A6YYD5 115 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 MYOCOSA0A1B0GUC4 107 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 EXOC1LA0A1B0GW35 172 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 C17orf105B2RV13 164 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 KLRC4-KLRK1H3BQV0 150 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 ASNA1O43681 348 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 FGF17O60258 216 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 SMIM24O75264 130 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 ETHE1O95571 254 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 TNNI3P19429 210 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 TLX1P31314 330 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-210ENST00000462125 CA7P43166 264 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 STT3AP46977 705 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 HNRNPH2P55795 449 aaKnown RBP12.28□□□□□ -0.44
C9orf3-210ENST00000462125 RBPJQ06330 500 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 TRAF3Q13114 568 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 GGTA1PQ4G0N0 100 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 RNFT1Q5M7Z0 435 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 C18orf63Q68DL7 685 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 C16orf47Q6ZP98 133 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-210ENST00000462125 Q6ZPB1 254 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-210ENST00000462125 LCA5Q86VQ0 697 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 FJX1Q86VR8 437 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 SULF2Q8IWU5 870 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 GPALPP1Q8IXQ4 340 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 CNPY4Q8N129 248 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM156Q8N614 296 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 POGLUT1Q8NBL1 392 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 C16orf52Q8NHV5 167 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 ZNF721Q8TF20 911 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 ATP6V1E2Q96A05 226 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 MTBPQ96DY7 904 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 SCYL1Q96KG9 808 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 SERPINI1Q99574 410 aa12.28□□□□□ -0.44
C9orf3-210ENST00000462125 KLF13Q9Y2Y9 288 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-210ENST00000462125 A0A1W2PR48 441 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 GOLGA6L10A6NI86 522 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 TMPRSS11DO60235 418 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SLC19A2O60779 497 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 ZG16O60844 167 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 EEDO75530 441 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 OR2J2O76002 312 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SEMA3DO95025 777 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 IGKV3-11P04433 115 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 RPS17P08708 135 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 FAM153BP0C7A2 387 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SSR4P51571 173 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 CCNG1P51959 295 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 RNF4P78317 190 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 TNFRSF17Q02223 184 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 ID2Q02363 134 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 FAM153CQ494X1 144 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 FRG2Q64ET8 278 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 BNC2Q6ZN30 1099 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 MDGA2Q7Z553 956 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 MILR1Q7Z6M3 343 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SPPL2CQ8IUH8 684 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 OR4N5Q8IXE1 308 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 CYP4Z2PQ8N1L4 340 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 CPSF7Q8N684 471 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 ZNF321PQ8N8H1 164 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 ZFP62Q8NB50 900 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SLC2A12Q8TD20 617 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 RBM18Q96H35 190 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 NSUN5Q96P11 429 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 FRG2BQ96QU4 278 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 OR8D2Q9GZM6 311 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 LIN28AQ9H9Z2 209 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 LYARQ9NX58 379 aaKnown RBP12.27□□□□□ -0.45
C9orf3-210ENST00000462125 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.45
C9orf3-210ENST00000462125 TRGV8A0A0C4DH27 118 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 WASHC1A8K0Z3 465 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 A8MT66 165 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 PPP6CO00743 305 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 PEX1O43933 1283 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 GPR75O95800 540 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 COL8A1P27658 744 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 GALNSP34059 522 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 BUD31P41223 144 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-210ENST00000462125 HK2P52789 917 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 FOLH1Q04609 750 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 SLC29A2Q14542 456 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 MPEG1Q2M385 716 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 MTFR2Q6P444 385 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 DGAT2L6Q6ZPD8 337 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 CHERPQ8IWX8 916 aaKnown RBP12.26□□□□□ -0.45
C9orf3-210ENST00000462125 ST13P4Q8IZP2 240 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-210ENST00000462125 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 TRPC4APQ8TEL6 797 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
C9orf3-210ENST00000462125 MTFMTQ96DP5 389 aaKnown RBP12.26□□□□□ -0.45
C9orf3-210ENST00000462125 DGAT2Q96PD7 388 aa12.26□□□□□ -0.45
C9orf3-210ENST00000462125 RASL10BQ96S79 203 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms