RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 OSBPL8Q9BZF1 889 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 SYNPO2LQ9H987 977 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 CCDC177Q9NQR7 707 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-206ENST00000461574 BEX4Q9NWD9 120 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-206ENST00000461574 HPF1Q9NWY4 346 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 SAMD15Q9P1V8 674 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 SLC2A6Q9UGQ3 507 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 FAM215AQ9Y5M1 114 aa4.67□□□□□ -1.66
BRCA1-206ENST00000461574 CHD3Q12873 2000 aaKnown RBP4.67□□□□□ -1.66
BRCA1-206ENST00000461574 ATP6AP2A0A1C7CYW4 349 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ANKRD34BA5PLL1 514 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 PABPN1LA6NDY0 278 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 CLCA1A8K7I4 914 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ERI2A8K979 691 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 HSPB2A8KAH6 182 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 EEF1E1-BLOC1S5C9J1V9 151 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 H3BMM5 538 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MYO1CO00159 1063 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 AQP7O14520 342 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NDUFS4O43181 175 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 EEF1E1O43324 174 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NIPSNAP2O75323 286 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 AVILO75366 819 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ATP6AP2O75787 350 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MYO1DO94832 1006 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MATN4O95460 622 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MBD3O95983 291 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ERGP11308 486 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 CHRM3P20309 590 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MAOAP21397 527 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 HRH2P25021 359 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ATP5DP30049 168 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 FMO4P31512 558 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MAGEA5P43359 124 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NAP1L1P55209 391 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 RELAQ04206 551 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 TRIM14Q14142 442 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 HERC3Q15034 1050 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 HSPB2Q16082 182 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 KLHL38Q2WGJ6 581 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 DEFB134Q4QY38 66 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 CATSPEREQ5SY80 951 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 RNF187Q5TA31 235 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 RIPPLY2Q5TAB7 128 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NDUFAF5Q5TEU4 345 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 HECTD2Q5U5R9 776 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 CAPN13Q6MZZ7 669 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MRNIPQ6NTE8 343 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NIPAL1Q6NVV3 410 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 C16orf47Q6ZP98 133 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 FAM47EQ6ZV65 393 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ZNF534Q76KX8 674 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 PCGF5Q86SE9 256 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 SDCCAG8Q86SQ7 713 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 PDSS2Q86YH6 399 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 SLC13A5Q86YT5 568 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 GPALPP1Q8IXQ4 340 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MPP5Q8N3R9 675 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 LIX1Q8N485 282 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 TBC1D19Q8N5T2 526 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 PLPP5Q8NEB5 264 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 OR2M7Q8NG81 312 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 OR5T3Q8NGG3 340 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 OR8K1Q8NGG5 319 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ZNF480Q8WV37 535 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 SLC13A3Q8WWT9 602 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 KRT35Q92764 455 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 RNASE6Q93091 150 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 VMP1Q96GC9 406 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 Q96MF0 132 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 ZNF778Q96MU6 729 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 WWC2-AS2Q96NR7 200 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 SECISBP2Q96T21 854 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 PKP4Q99569 1192 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 FAM173AQ9BQD7 235 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 FAM129AQ9BZQ8 928 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 P2RY12Q9H244 342 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 RHBGQ9H310 441 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 TRIM45Q9H8W5 580 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 L2HGDHQ9H9P8 463 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 NHEJ1Q9H9Q4 299 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 TMEM184CQ9NVA4 438 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 IFNKQ9P0W0 207 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MARCH4Q9P2E8 410 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 INTUQ9ULD6 942 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 YARS2Q9Y2Z4 477 aaKnown RBP4.66□□□□□ -1.66
BRCA1-206ENST00000461574 LIPGQ9Y5X9 500 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 MPDZO75970 2070 aa4.66□□□□□ -1.66
BRCA1-206ENST00000461574 TRGV5A0A0B4J1U4 118 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 A0A0G2JMM0 328 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 A0A1W2PPB8 328 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 A0A1W2PRS3 328 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 FEZF1A0PJY2 475 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 KIR3DP1A8MWS1 328 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 E7ENX8 843 aa4.65□□□□□ -1.67
BRCA1-206ENST00000461574 SYT5O00445 386 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms