RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 SARM1Q6SZW1 724 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM83HQ6ZRV2 1179 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 RINLQ6ZS11 566 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ARCQ7LC44 396 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 SLFN11Q7Z7L1 901 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TRIM73Q86UV7 250 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CAND1Q86VP6 1230 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 AMIGO1Q86WK6 493 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC15A3Q8IY34 581 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 LRRC56Q8IYG6 542 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 DNAJC22Q8N4W6 341 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TRAM1L1Q8N609 369 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CCDC185Q8N715 623 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ARIH2OSQ8N7S6 290 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ZFP62Q8NB50 900 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 PCYOX1LQ8NBM8 494 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 GDAP1Q8TB36 358 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 BRSK1Q8TDC3 778 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 NTAN1Q96AB6 310 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TRMT61AQ96FX7 289 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ZNF599Q96NL3 588 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 SMIM14Q96QK8 99 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 LYSMD1Q96S90 227 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 MGME1Q9BQP7 344 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 TUBGCP2Q9BSJ2 902 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 CNPY3Q9BT09 278 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 NUP85Q9BW27 656 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC39A8Q9C0K1 460 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 WWP1Q9H0M0 922 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 THAP2Q9H0W7 228 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 DEFB127Q9H1M4 99 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 UPF2Q9HAU5 1272 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ACP6Q9NPH0 428 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 C14orf105Q9NVL8 296 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ALKBH4Q9NXW9 302 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 C6orf203Q9P0P8 240 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ACAD8Q9UKU7 415 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 ACSL5Q9ULC5 683 aa3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 EPN1Q9Y6I3 576 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-211ENST00000460558 IGLV3-12A0A075B6K2 115 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 A0A0J9YY10 115 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM90A20PA6NIJ5 464 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM157AC9JC47 383 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC16A3O15427 465 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 POLR2DO15514 142 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PRPF4O43172 522 aaKnown RBP eCLIP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 RGS10O43665 173 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TRIAP1O43715 76 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PEX1O43933 1283 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 GPRIN2O60269 458 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 C8orf89P0DMQ9 161 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 UGT2B7P16662 529 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FBLP22087 321 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 CA4P22748 312 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 IGFBP5P24593 272 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 CNTFP26441 200 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 EPHA3P29320 983 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PBLDP30039 288 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SDC4P31431 198 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 KRT9P35527 623 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PRKAG1P54619 331 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 MTTPP55157 894 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TIRAPP58753 221 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TPI1P60174 286 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 VLDLRP98155 873 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TMEM115Q12893 351 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC39A14Q15043 492 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 EXT1Q16394 746 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 C15orf59Q2T9L4 293 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 CD300EQ496F6 205 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 RAB6CQ53S08 254 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM120AOSQ5T036 256 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 CYB5R2Q6BCY4 276 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 RGS9BPQ6ZS82 235 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 IL17RELQ6ZVW7 336 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 ABHD13Q7L211 337 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 DTX2Q86UW9 622 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TRABD2AQ86V40 505 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 ARHGEF19Q8IW93 802 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 ADGRF3Q8IZF5 1079 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PYROXD2Q8N2H3 581 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 MSANTD4Q8NCY6 345 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 WDR60Q8WVS4 1066 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 IGFBPL1Q8WX77 278 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 METTL21AQ8WXB1 218 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 ATG4AQ8WYN0 398 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 HTRA1Q92743 480 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC35C1Q96A29 364 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 SARAFQ96BY9 339 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM136AQ96C01 138 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 FAF2Q96CS3 445 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 PIK3IP1Q96FE7 263 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 MAELQ96JY0 434 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 HIST1H2AAQ96QV6 131 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 TNFRSF13CQ96RJ3 184 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 NPAS2Q99743 824 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 C11orf70Q9BRQ4 267 aa3.7□□□□□ -1.82
ECHDC1-211ENST00000460558 RAB6CQ9H0N0 254 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms