RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CIDECQ96AQ7 238 aaPredicted RBP13.39□□□□□ -0.27
ERCC3-205ENST00000460485 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 SPATA5L1Q9BVQ7 753 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 ERVK-11Q9UQG0 969 aa13.39□□□□□ -0.27
ERCC3-205ENST00000460485 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
ERCC3-205ENST00000460485 IGKV1-8A0A0C4DH67 115 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 LOC100130705A0A1B0GUX0 176 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 A6NCN8 305 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ANTXRLA6NF34 631 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 CHURC1-FNTBB4DL54 471 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PLOD2O00469 737 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 BCKDKO14874 412 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 TNFSF14O43557 240 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 NTRK1P04629 796 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 JUNBP17275 347 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 HIST1H1TP22492 207 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PAX7P23759 505 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 KHKP50053 298 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 CDK9P50750 372 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 BLKP51451 505 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 LIMK1P53667 647 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 CYP4F2P78329 520 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 VLDLRP98155 873 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 MC1RQ01726 317 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 TEKQ02763 1124 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 KCNAB2Q13303 367 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 SPDYE7PQ495Y7 208 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ZNF691Q5VV52 312 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ABHD17CQ6PCB6 329 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 TSSK4Q6SA08 328 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PAQR7Q86WK9 346 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ADGRF3Q8IZF5 1079 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ZNF655Q8N720 491 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 TMEM145Q8NBT3 493 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 OR56A1Q8NGH5 318 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 FBLIM1Q8WUP2 373 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 FAM3CQ92520 227 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 NR4A3Q92570 626 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 MS4A6EQ96DS6 147 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ZNF607Q96SK3 696 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 MBOAT4Q96T53 435 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 DPH7Q9BTV6 452 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PCED1AQ9H1Q7 454 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 RUBCNLQ9H714 662 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 SLC6A20Q9NP91 592 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 CCNB1IP1Q9NPC3 277 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PRDM8Q9NQV8 689 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PAPOLBQ9NRJ5 636 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 RSL24D1Q9UHA3 163 aaKnown RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 TMEFF2Q9UIK5 374 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PHF11Q9UIL8 331 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PSME2Q9UL46 239 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ABCG2Q9UNQ0 655 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 ENTPD4Q9Y227 616 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 PCDHGB5Q9Y5G0 923 aa13.38□□□□□ -0.27
ERCC3-205ENST00000460485 FEZF1A0PJY2 475 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 POM121BA6NF01 834 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 MYO1GB0I1T2 1018 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 TM4SF5O14894 197 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ZW10O43264 779 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ABCB7O75027 752 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 SLITRK5O94991 958 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 RASGRP1O95267 797 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 CPNE6O95741 557 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 TNFP01375 233 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 GBAP04062 536 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ETFAP13804 333 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 GABRG2P18507 467 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 CD72P21854 359 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 CNR2P34972 360 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 BCL6P41182 706 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ACTR1BP42025 376 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ACTR1AP61163 376 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ROR2Q01974 943 aaKnown RBP13.37□□□□□ -0.27
ERCC3-205ENST00000460485 CEBPEQ15744 281 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 MANEAQ5SRI9 462 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 NDUFAF5Q5TEU4 345 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 KRT73Q86Y46 540 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 TRIM48Q8IWZ4 208 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 C2orf73Q8N5S3 287 aaPredicted RBP13.37□□□□□ -0.27
ERCC3-205ENST00000460485 NFKBIDQ8NI38 313 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 FKBP10Q96AY3 582 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 ERLEC1Q96DZ1 483 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 TPD52L3Q96J77 140 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 MUS81Q96NY9 551 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 PITX2Q99697 317 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 MYOCQ99972 504 aa13.37□□□□□ -0.27
ERCC3-205ENST00000460485 GABARAPL3Q9BY60 117 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms