RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 POLEQ07864 2286 aa21.39■■□□□ 1.02
PTPN4-208ENST00000460289 A0A1B0GTL3 188 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 A0A1W2PPM1 405 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 ARHGAP10A1A4S6 786 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 GLRA3O75311 464 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 GPR75O95800 540 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 NR2F6P10588 404 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 KRT15P19012 456 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 TSPAN8P19075 237 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 CCT5P48643 541 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 SSR4P51571 173 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 PRKAA2P54646 552 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 PLIN5Q00G26 463 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 RASA2Q15283 850 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 LETMD1Q6P1Q0 360 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 OR5L2Q8NGL0 311 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 SLC2A12Q8TD20 617 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 SELENOMQ8WWX9 145 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 CCDC126Q96EE4 140 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 PELOQ9BRX2 385 aaKnown RBP21.39■■□□□ 1.01
PTPN4-208ENST00000460289 ANKZF1Q9H8Y5 726 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 BRF2Q9HAW0 419 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 MYOTQ9UBF9 498 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 SEC14L3Q9UDX4 400 aa21.39■■□□□ 1.01
PTPN4-208ENST00000460289 A0A1W2PR48 441 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 ASPDHA6ND91 283 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 NME2P1O60361 137 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 PDYNP01213 254 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 ALOX15P16050 662 aaPredicted RBP21.38■■□□□ 1.01
PTPN4-208ENST00000460289 NME2P22392 152 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 MST1P26927 711 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 SLCO1A2P46721 670 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 PMP22Q01453 160 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 C4orf17Q53FE4 359 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 GFRALQ6UXV0 394 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 ST13P4Q8IZP2 240 aaPredicted RBP21.38■■□□□ 1.01
PTPN4-208ENST00000460289 METTL4Q8N3J2 472 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 L3HYPDHQ96EM0 354 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 ART5Q96L15 291 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 TMEM237Q96Q45 408 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF382Q96SR6 550 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 MRPL1Q9BYD6 325 aaKnown RBP21.38■■□□□ 1.01
PTPN4-208ENST00000460289 SLC12A4Q9UP95 1085 aa21.38■■□□□ 1.01
PTPN4-208ENST00000460289 WIPF3A6NGB9 483 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 PRKNO60260 465 aaPredicted RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 CDH16O75309 829 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 OR2J2O76002 312 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 OR4F21O95013 312 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KRT6AP02538 564 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 GBAP04062 536 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KRT6BP04259 564 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KLK1P06870 262 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KRT6CP48668 564 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 RNF4P78317 190 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 ALDH6A1Q02252 535 aaKnown RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KRTCAP3Q53RY4 240 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 CCNYL2Q5T2Q4 361 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF227Q86WZ6 799 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 GPALPP1Q8IXQ4 340 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 CYP4Z2PQ8N1L4 340 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 PPWD1Q96BP3 646 aaKnown RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 SENP5Q96HI0 755 aaPredicted RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 FARSBQ9NSD9 589 aaKnown RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF225Q9UK10 706 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 GRID1Q9ULK0 1009 aa21.37■■□□□ 1.01
PTPN4-208ENST00000460289 KLF13Q9Y2Y9 288 aaPredicted RBP21.37■■□□□ 1.01
PTPN4-208ENST00000460289 SVILO95425 2214 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 HIVEP3Q5T1R4 2406 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 TMEM200CA6NKL6 621 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 KLRC4-KLRK1H3BQV0 150 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 GUCY1B2O75343 617 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 PRKRAO75569 313 aaKnown RBP21.36■■□□□ 1.01
PTPN4-208ENST00000460289 UNC5CO95185 931 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 AIFM1O95831 613 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 STSP08842 583 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 GP1BBP13224 206 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 HSD3B1P14060 373 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 HSD3B2P26439 372 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 NAA20P61599 178 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 RBPJQ06330 500 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 CCDC153Q494R4 210 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 OR52E8Q6IFG1 317 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 SH2D5Q6ZV89 423 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 GPRIN3Q6ZVF9 776 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF321PQ8N8H1 164 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 CDYL2Q8N8U2 506 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 METTL6Q8TCB7 284 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 ZNF721Q8TF20 911 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 ASB15Q8WXK1 588 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 LIN28AQ9H9Z2 209 aaKnown RBP21.36■■□□□ 1.01
PTPN4-208ENST00000460289 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.36■■□□□ 1.01
PTPN4-208ENST00000460289 ERVK-11Q9UQG0 969 aa21.36■■□□□ 1.01
PTPN4-208ENST00000460289 USP9YO00507 2555 aaPredicted RBP21.36■■□□□ 1.01
PTPN4-208ENST00000460289 A0A1B0GUH1 482 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 CCDC151A5D8V7 595 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 GLOD5A6NK44 160 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 SMIM23A6NLE4 172 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 A8MVJ9 347 aa21.35■■□□□ 1.01
PTPN4-208ENST00000460289 LRRTM2O43300 516 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms