RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 GAL3ST1Q99999 423 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 HRASLS2Q9NWW9 162 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 BTNL2Q9UIR0 455 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 GMEB1Q9Y692 573 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 DOCK2Q92608 1830 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 TNRC6CQ9HCJ0 1690 aaKnown RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 MID1O15344 667 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PCDHGA12O60330 932 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ADAP00813 363 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 GNAO1P09471 354 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ADRB3P13945 408 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PTNP21246 168 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CDK5R2Q13319 367 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 UBXN2BQ14CS0 331 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 DECR1Q16698 335 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CYP4V2Q6ZWL3 525 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 DCP2Q8IU60 420 aaKnown RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 NPLQ9BXD5 320 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 NFKBIL1Q9UBC1 381 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 UPB1Q9UBR1 384 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 A0A1W2PRQ8 180 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ISPDA4D126 451 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 OR6C70A6NIJ9 312 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ZNF701M0R085 212 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 APOL3O95236 402 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 TYRP1P17643 537 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CSNK1DP48730 415 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 POU6F2P78424 691 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CATSPEREQ5SY80 951 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CPZQ66K79 652 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 SERPINA11Q86U17 422 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 GID4Q8IVV7 300 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 HS3ST5Q8IZT8 346 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 PSD4Q8NDX1 1056 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 OR2T33Q8NG76 320 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 ECHDC3Q96DC8 303 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 CPEB1Q9BZB8 566 aaKnown RBP14.12□□□□□ -0.15
PTPRU-205ENST00000460170 EXO5Q9H790 373 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 IL23AQ9NPF7 189 aa14.12□□□□□ -0.15
PTPRU-205ENST00000460170 LSM1O15116 133 aaKnown RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 RPP14O95059 124 aaKnown RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 YES1P07947 543 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 HK1P19367 917 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 NTHL1P78549 312 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 PROX2Q3B8N5 592 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 DEFB134Q4QY38 66 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 OR4C11Q6IEV9 310 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 FRMD6Q96NE9 622 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 EPYCQ99645 322 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 P2RY13Q9BPV8 354 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 DZANK1Q9NVP4 752 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 GJD2Q9UKL4 321 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TLX3O43711 291 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 KIAA0513O60268 411 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 ADAMTS4O75173 837 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TRIM3O75382 744 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 OR12D2P58182 307 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 CD83Q01151 205 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 HMGN2P46Q86SG4 172 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 SLC9B2Q86UD5 537 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 KLHDC9Q8NEP7 349 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 GAS2L1Q99501 681 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TTYH1Q9H313 450 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 GPR83Q9NYM4 423 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 PHF24Q9UPV7 400 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 H3BMQ9 156 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 E2F3O00716 465 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TNFRSF1BP20333 461 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 NRG3P56975 720 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 NCS1P62166 190 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 SELENOWP63302 87 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 AAK1Q2M2I8 961 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TCEAL5Q5H9L2 206 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 ZBTB8BQ8NAP8 495 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 DENND6BQ8NEG7 585 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 FATE1Q969F0 183 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 COG8Q96MW5 612 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 WDR92Q96MX6 357 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 LHX3Q9UBR4 397 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 AASSQ9UDR5 926 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TNFRSF10BO14763 440 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TCEA1P23193 301 aaKnown RBP14.11□□□□□ -0.15
PTPRU-205ENST00000460170 MAP3K8P41279 467 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 RAB28P51157 221 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 HYAL2Q12891 473 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 TMEM107Q6UX40 140 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 CEP68Q76N32 757 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 HSD11B1LQ7Z5J1 315 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 SIX5Q8N196 739 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 FANK1Q8TC84 345 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 PHOSPHO1Q8TCT1 267 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 GTF2H4Q92759 462 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 LRR1Q96L50 414 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 WACQ9BTA9 647 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 BCL2L14Q9BZR8 327 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 KCNK12Q9HB15 430 aa14.11□□□□□ -0.15
PTPRU-205ENST00000460170 SLAMF8Q9P0V8 285 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms