RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 SPATA2Q9UM82 520 aa4.92□□□□□ -1.62
CKAP2-204ENST00000459902 FOXA2Q9Y261 457 aaPredicted RBP4.92□□□□□ -1.62
CKAP2-204ENST00000459902 KIAA0513O60268 411 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 RTN2O75298 545 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 SEMA4FO95754 770 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 CASP3P42574 277 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 SLC1A6P48664 564 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 UCP2P55851 309 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 HEPACAMQ14CZ8 416 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 STX1AQ16623 288 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 AGAP7PQ5VUJ5 663 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 NUFIP2Q7Z417 695 aaKnown RBP4.91□□□□□ -1.62
CKAP2-204ENST00000459902 P2RY8Q86VZ1 359 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 CDC20BQ86Y33 519 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 FBXW8Q8N3Y1 598 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 SIDT2Q8NBJ9 832 aaKnown RBP4.91□□□□□ -1.62
CKAP2-204ENST00000459902 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 CDHR1Q96JP9 859 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 PSMB7Q99436 277 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 TSPYL1Q9H0U9 437 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 LIME1Q9H400 295 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 MARCH7Q9H992 704 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 TECRQ9NZ01 308 aaKnown RBP4.91□□□□□ -1.62
CKAP2-204ENST00000459902 TEKT2Q9UIF3 430 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 SMAD5-AS1Q9Y6J3 95 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 FGD5Q6ZNL6 1462 aa4.91□□□□□ -1.62
CKAP2-204ENST00000459902 SH3PXD2BA1X283 911 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 BCLAF3A2AJT9 711 aaKnown RBP4.9□□□□□ -1.63
CKAP2-204ENST00000459902 GOSR1O95249 250 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 HCKP08631 526 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 BCL3P20749 454 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 PPP2R1AP30153 589 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 PTGER3P43115 390 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 KCNK10P57789 538 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 KRTAP5-11Q6L8G4 156 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 EMBQ6PCB8 327 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 REG3GQ6UW15 175 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 STHQ8IWL8 128 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 GVQW1Q8N7I0 195 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 ZNF781Q8N8C0 355 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 OR4Q3Q8NH05 313 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 OR4L1Q8NH43 312 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 ST7LQ8TDW4 575 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 CFAP36Q96G28 342 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 HSD17B14Q9BPX1 270 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 DCTN5Q9BTE1 182 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 RPP25Q9BUL9 199 aaKnown RBP4.9□□□□□ -1.63
CKAP2-204ENST00000459902 MRPL9Q9BYD2 267 aaKnown RBP4.9□□□□□ -1.63
CKAP2-204ENST00000459902 NT5DC2Q9H857 520 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 SP140LQ9H930 580 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 DNAJC11Q9NVH1 559 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 EXOC6BQ9Y2D4 811 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 FBXO7Q9Y3I1 522 aa4.9□□□□□ -1.63
CKAP2-204ENST00000459902 RENP00797 406 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CT45A8P0DMV1 189 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CT45A9P0DMV2 189 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 MTIF2P46199 727 aaKnown RBP4.89□□□□□ -1.63
CKAP2-204ENST00000459902 TEFQ10587 303 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 MSLNQ13421 630 aaPredicted RBP4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CCL14Q16627 93 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 TMEM44Q2T9K0 475 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CT45A2Q5DJT8 189 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 DCAF12Q5T6F0 453 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 LEMD1Q68G75 181 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 SPINK14Q6IE38 97 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 ZNF774Q6NX45 483 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 TMUB2Q71RG4 321 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CCDC71Q8IV32 467 aaPredicted RBP4.89□□□□□ -1.63
CKAP2-204ENST00000459902 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 SFRP1Q8N474 314 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 GOLGA5Q8TBA6 731 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 ESAMQ96AP7 390 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 RUNDC3BQ96NL0 473 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 RBM24Q9BX46 236 aaKnown RBP4.89□□□□□ -1.63
CKAP2-204ENST00000459902 GDF3Q9NR23 364 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 DDX28Q9NUL7 540 aaKnown RBP4.89□□□□□ -1.63
CKAP2-204ENST00000459902 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 MGAT4AQ9UM21 535 aa4.89□□□□□ -1.63
CKAP2-204ENST00000459902 TEX48A0A1B0GUV7 120 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 PHF1O43189 567 aaPredicted RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 KINO60870 393 aaKnown RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 GMNNO75496 209 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 ANXA9O76027 345 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 TXNDC12O95881 172 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 MT-ND1P03886 318 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 STIP1P31948 543 aaKnown RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 LIMK2P53671 638 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 ZNF239Q16600 458 aaKnown RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 EPC2Q52LR7 807 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 ODF2Q5BJF6 829 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 ITIH5Q86UX2 942 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 UNC45BQ8IWX7 931 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
CKAP2-204ENST00000459902 RTL3Q8N8U3 475 aaKnown RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 MRPL53Q96EL3 112 aaKnown RBP4.88□□□□□ -1.63
CKAP2-204ENST00000459902 CPQQ9Y646 472 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms