RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 APCDD1LQ8NCL9 501 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 OR14A16Q8NHC5 309 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 CAVIN3Q969G5 261 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 CNPPD1Q9BV87 410 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 RNF32Q9H0A6 362 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 DDX31Q9H8H2 851 aaKnown RBP17.42■□□□□ 0.38
USP39-209ENST00000458268 OLAHQ9NV23 265 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 LRFN1Q9P244 771 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 ZNF223Q9UK11 482 aaPredicted RBP17.42■□□□□ 0.38
USP39-209ENST00000458268 STK38LQ9Y2H1 464 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 FIS1Q9Y3D6 152 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 ASB4Q9Y574 426 aa17.42■□□□□ 0.38
USP39-209ENST00000458268 BLACEA4D250 179 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 PROM1O43490 865 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 PRKNO60260 465 aaPredicted RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 RASAL1O95294 804 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 ESRRBO95718 433 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 CD46P15529 392 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 CHN1P15882 459 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 MAPK12P53778 367 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 MLF1P58340 268 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 PLIN5Q00G26 463 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 TERF2Q15554 542 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 MAPKAPK3Q16644 382 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 ZNF468Q5VIY5 522 aaPredicted RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 SH2D5Q6ZV89 423 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 RIBC1Q8N443 379 aaPredicted RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 TMEM156Q8N614 296 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 CDC26Q8NHZ8 85 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 SLC2A12Q8TD20 617 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 PTPMT1Q8WUK0 201 aaPredicted RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 TANKQ92844 425 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 RBM18Q96H35 190 aaKnown RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 APOPT1Q96IL0 206 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 CENPHQ9H3R5 247 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 NMRK1Q9NWW6 199 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 COPS7AQ9UBW8 275 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 VTI1BQ9UEU0 232 aa17.41■□□□□ 0.38
USP39-209ENST00000458268 SPENQ96T58 3664 aaKnown RBP17.41■□□□□ 0.38
USP39-209ENST00000458268 ANKUB1A6NFN9 424 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 WWP2O00308 870 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 DYRK3O43781 588 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 ULK1O75385 1050 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 ITGA10O75578 1167 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 ZFAND5O76080 213 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 ALOX15P16050 662 aaPredicted RBP17.4■□□□□ 0.38
USP39-209ENST00000458268 ALDH9A1P49189 494 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 ARFIP1P53367 373 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 PKNOX1P55347 436 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 HMGCS1Q01581 520 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 C10orf62Q5T681 223 aaPredicted RBP17.4■□□□□ 0.38
USP39-209ENST00000458268 OR52E8Q6IFG1 317 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 MRM1Q6IN84 353 aaKnown RBP17.4■□□□□ 0.38
USP39-209ENST00000458268 HSDL2Q6YN16 418 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 DGAT2L6Q6ZPD8 337 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 METTL4Q8N3J2 472 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 BCORP1Q8N888 145 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 RDH11Q8TC12 318 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 AGAP11Q8TF27 550 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 FAR1Q8WVX9 515 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 FAM111AQ96PZ2 611 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 TAAR6Q96RI8 345 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 PSD3Q9NYI0 1048 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 MID2Q9UJV3 735 aa17.4■□□□□ 0.38
USP39-209ENST00000458268 A0A1W2PS29 197 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 CCDC151A5D8V7 595 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SYNDIG1LA6NDD5 238 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 PGRMC2O15173 223 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 AGFG2O95081 481 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 ENO1P06733 434 aaKnown RBP17.39■□□□□ 0.37
USP39-209ENST00000458268 PIK3R1P27986 724 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SERPINB3P29508 390 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 STT3AP46977 705 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 CYB561P49447 251 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 FOXA1P55317 472 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SLC18A2Q05940 514 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 ZNF267Q14586 743 aaPredicted RBP17.39■□□□□ 0.37
USP39-209ENST00000458268 IMPG1Q17R60 797 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SPDYAQ5MJ70 313 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 NDUFAF5Q5TEU4 345 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 GALNTL5Q7Z4T8 443 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 C10orf107Q8IVU9 208 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 MMP21Q8N119 569 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 HORMAD2Q8N7B1 307 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 MORN4Q8NDC4 146 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 TMEM125Q96AQ2 219 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SMC6Q96SB8 1091 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 EBPLQ9BY08 206 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 TSPAN10Q9H1Z9 355 aaPredicted RBP17.39■□□□□ 0.37
USP39-209ENST00000458268 BRF2Q9HAW0 419 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 PFDN4Q9NQP4 134 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 VPS29Q9UBQ0 182 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 PPT2Q9UMR5 302 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 ERVK-11Q9UQG0 969 aa17.39■□□□□ 0.37
USP39-209ENST00000458268 PRRC2CQ9Y520 2896 aaKnown RBP17.39■□□□□ 0.37
USP39-209ENST00000458268 CROCCQ5TZA2 2017 aa17.38■□□□□ 0.37
USP39-209ENST00000458268 GNG14A0A1W2PPG7 69 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms