RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLC22A1O15245 554 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CLIC2O15247 247 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 SLC31A2O15432 143 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ST8SIA3O43173 380 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PAPSS1O43252 624 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 BUD23O43709 281 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 LANCL1O43813 399 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 KLK8O60259 260 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CST8O60676 142 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PRAMEF4O60810 478 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PRAMEF11O60813 436 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 USP12O75317 370 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 BCAS1O75363 584 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 CNTN5O94779 1100 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 SLC16A8O95907 504 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GH1P01241 217 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LCATP04180 440 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GPIP06744 558 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LPLP06858 475 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PGK2P07205 417 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CSF1RP07333 972 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 OCMP0CE72 109 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 TRIM49P0CI25 452 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TRIM49CP0CI26 452 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 G6PDP11413 515 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 EGR1P18146 543 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GABRB1P18505 474 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ADRA2CP18825 462 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CNR1P21554 472 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PROZP22891 400 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ACVR2AP27037 513 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 SERPINB5P36952 375 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TMPOP42166 694 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 STAT6P42226 847 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 NAMPTP43490 491 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 KIR2DL3P43628 341 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CAPZBP47756 277 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 C21orf59P57076 290 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 NHLH1Q02575 133 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 RELAQ04206 551 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PMPCAQ10713 525 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GRAPQ13588 217 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LTB4RQ15722 352 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 NDUFAF6Q330K2 333 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TMEM35AQ53FP2 167 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 KHDC1LQ5JSQ8 128 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LY6G5CQ5SRR4 150 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GPR107Q5VW38 600 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 KHDRBS2Q5VWX1 349 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 LIPJQ5W064 366 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 ANKRD26P1Q6NSI1 321 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TMEM88Q6PEY1 159 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LRRC74BQ6ZQY2 392 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LRRC55Q6ZSA7 311 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 P4HA3Q7Z4N8 544 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ABHD12BQ7Z5M8 362 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 SETD3Q86TU7 594 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 CXorf67Q86X51 503 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 VRK3Q8IV63 474 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ZZZ3Q8IYH5 903 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ADGRF4Q8IZF3 695 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 LNX2Q8N448 690 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ADPRHL1Q8NDY3 354 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MCUQ8NE86 351 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TMEM185AQ8NFB2 350 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 BEST2Q8NFU1 509 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 OR4A15Q8NGL6 344 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 VANGL1Q8TAA9 524 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 C9orf43Q8TAL5 461 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 PROKR1Q8TCW9 393 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 FAM172AQ8WUF8 416 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 CACNG8Q8WXS5 425 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MAFIPQ8WZ33 124 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 EME1Q96AY2 570 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MCRS1Q96EZ8 462 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 THOC3Q96J01 351 aaKnown RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 ZNF285Q96NJ3 590 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 WDFY2Q96P53 400 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 VRK1Q99986 396 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 FAM110AQ9BQ89 295 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 COPS4Q9BT78 406 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MED10Q9BTT4 135 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 DUSP26Q9BV47 211 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 FNDC11Q9BVV2 318 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TEKT3Q9BXF9 490 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 GSDMCQ9BYG8 508 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 POLR3FQ9H1D9 316 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 EPC1Q9H2F5 836 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 TTYH1Q9H313 450 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 UBQLN3Q9H347 655 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 SMOC2Q9H3U7 446 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 PLEKHA2Q9HB19 425 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MYOZ1Q9NP98 299 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 CTPS2Q9NRF8 586 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 RNF146Q9NTX7 359 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 ZNF701Q9NV72 531 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 BEX4Q9NWD9 120 aaPredicted RBP5.14□□□□□ -1.59
VPS41-209ENST00000457055 OSER1Q9NX31 292 aa5.14□□□□□ -1.59
VPS41-209ENST00000457055 MTCH1Q9NZJ7 389 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms