RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 AGAP7PQ5VUJ5 663 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ZNF770Q6IQ21 691 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 TNFAIP8L2Q6P589 184 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 PROX1Q92786 737 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 RPL3LQ92901 407 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 RGMAQ96B86 450 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 LGALS12Q96DT0 336 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 CHFRQ96EP1 664 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ITPAQ9BY32 194 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ZNF556Q9HAH1 456 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 GDE1Q9NZC3 331 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ADAM29Q9UKF5 820 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ACSL5Q9ULC5 683 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 ZNF232Q9UNY5 417 aa17.46■□□□□ 0.39
SEMA3B-209ENST00000456560 SZT2Q5T011 3432 aa17.46■□□□□ 0.38
SEMA3B-209ENST00000456560 FFAR1O14842 300 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 NDUFS4O43181 175 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 PCDH8O95206 1070 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 IFNW1P05000 195 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 SLC35G4P0C7Q5 338 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GRK3P35626 688 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GSTM5P46439 218 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 CSNK1G2P78368 415 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 RUNX3Q13761 415 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GANABQ14697 944 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 KIAA1161Q6NSJ0 714 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 VITQ6UXI7 678 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 C6orf120Q7Z4R8 191 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 NUDT13Q86X67 352 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GPR32P1Q8NGA4 272 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 PHF10Q8WUB8 498 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 TMEM19Q96HH6 336 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 SFXN1Q9H9B4 322 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 NEUROD4Q9HD90 331 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 YBX2Q9Y2T7 364 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 TRPM6Q9BX84 2022 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GPR89AB7ZAQ6 455 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 LCMT2O60294 686 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 MFN2O95140 757 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 GPR89BP0CG08 455 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 DDX5P17844 614 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 TEAD1P28347 426 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 TRIM23P36406 574 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 LIPAP38571 399 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 IDH2P48735 452 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 LIM2P55344 173 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 DMPKQ09013 629 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 OR6Q1Q8NGQ2 317 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 INSM2Q96T92 566 aaPredicted RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 RSPH9Q9H1X1 276 aaPredicted RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 DDX31Q9H8H2 851 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 AMBNQ9NP70 447 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 C5AR2Q9P296 337 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 FTSJ1Q9UET6 329 aa17.45■□□□□ 0.38
SEMA3B-209ENST00000456560 C5orf58C9J3I9 102 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 OR1F1O43749 312 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 GASTP01350 101 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 BCHEP06276 602 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 MLF2Q15773 248 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 CST6Q15828 149 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 DUSP6Q16828 381 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 INAVAQ3KP66 663 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 C2orf27AQ580R0 203 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 PLEKHG7Q6ZR37 379 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 AMER3Q8N944 861 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 SCAIQ8N9R8 606 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 PSMA8Q8TAA3 256 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 CREB3L4Q8TEY5 395 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 FERD3LQ96RJ6 166 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 MAPKAP1Q9BPZ7 522 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 KLHL25Q9H0H3 589 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 TEX10Q9NXF1 929 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 RHCGQ9UBD6 479 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 OR1A2Q9Y585 309 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 SNX11Q9Y5W9 270 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 STON1Q9Y6Q2 735 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 ENPP2Q13822 863 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 PTGES3Q15185 160 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 IRF4Q15306 451 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 KLHL17Q6TDP4 642 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 AQP11Q8NBQ7 271 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 UTP15Q8TED0 518 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 UCN3Q969E3 161 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 GTPBP3Q969Y2 492 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 EXOSC8Q96B26 276 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 AICDAQ9GZX7 198 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 NMNAT1Q9HAN9 279 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 ACSS1Q9NUB1 689 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 TAS2R7Q9NYW3 318 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 SERGEFQ9UGK8 458 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 OSGIN1Q9UJX0 560 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 SLC6A14Q9UN76 642 aa17.44■□□□□ 0.38
SEMA3B-209ENST00000456560 ZAR1LA6NP61 321 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 HMGN4O00479 90 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 POU2F1P14859 743 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 WASP42768 502 aa17.43■□□□□ 0.38
SEMA3B-209ENST00000456560 NUDT6P53370 316 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms