RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 JUPP14923 745 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 TYMPP19971 482 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SDHBP21912 280 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 EVX1P49640 407 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 XKP51811 444 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PTPN5P54829 565 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CDK6Q00534 326 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 IRF8Q02556 426 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 FGFBP1Q14512 234 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HEPACAMQ14CZ8 416 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SNAPC1Q16533 368 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SLC5A12Q1EHB4 618 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 BCL2L15Q5TBC7 163 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 FAM180BQ6P0A1 224 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 UNC5DQ6UXZ4 953 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 B3GLCTQ6Y288 498 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF782Q6ZMW2 699 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 MRPL10Q7Z7H8 261 aaKnown RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 LAPTM4BQ86VI4 370 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 COMMD7Q86VX2 200 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 AP3S1Q92572 193 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CIDECQ96AQ7 238 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 C11orf24Q96F05 449 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SAMD11Q96NU1 681 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 RSPO3Q9BXY4 272 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SPNS1Q9H2V7 528 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CDCP1Q9H5V8 836 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 C1GALT1Q9NS00 363 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 RUVBL1Q9Y265 456 aaKnown RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SF3B6Q9Y3B4 125 aaKnown RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 KCNE2Q9Y6J6 123 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CHD5Q8TDI0 1954 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 GNG14A0A1W2PPG7 69 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SHISA3A0PJX4 238 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 E7EQ34 232 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 QSOX1O00391 747 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 KPNA5O15131 536 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 OR10H3O60404 316 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PAHP00439 452 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SYPP08247 313 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HIST1H2AGP0C0S8 130 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 RHCEP18577 417 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HIST1H2ADP20671 130 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PPIBP23284 216 aaKnown RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SSTR2P30874 369 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 IRS1P35568 1242 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CD79BP40259 229 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 GSTM5P46439 218 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 INPP1P49441 399 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CPT1AP50416 773 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PFN3P60673 137 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PPP3R1P63098 170 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 EEF1A2Q05639 463 aaKnown RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF177Q13360 481 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PLK5Q496M5 336 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 TMEM201Q5SNT2 666 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 CCNJQ5T5M9 372 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ASB18Q6ZVZ8 466 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 OR11H7Q8NGC8 314 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 WDR20Q8TBZ3 569 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 TMEM163Q8TC26 289 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 AP2M1Q96CW1 435 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HIST1H2AHQ96KK5 128 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SEPT5Q99719 369 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HIST1H2AJQ99878 128 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 H2AFJQ9BTM1 129 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SLC12A9Q9BXP2 914 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 DNAJC11Q9NVH1 559 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 RABL2AQ9UBK7 228 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 LHX3Q9UBR4 397 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF282Q9UDV7 671 aaPredicted RBP9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ENOPH1Q9UHY7 261 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF222Q9UK12 451 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 HCN2Q9UL51 889 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PADI3Q9ULW8 664 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 SCML1Q9UN30 329 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PCDHB8Q9UN66 801 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 PCDHB7Q9Y5E2 793 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
CLIP4-208ENST00000456385 TRBV5-4A0A0C4DH59 114 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MGAT4DA6NG13 374 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ATP6V1G2-DDX39BF2Z307 99 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 KLKB1P03952 638 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RAF1P04049 648 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 IFNW1P05000 195 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 NNMTP40261 264 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ETV3P41162 512 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RHOAP61586 193 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 MC1RQ01726 317 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ILKQ13418 452 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 DOC2AQ14183 400 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 GRB14Q14449 540 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 SF3A2Q15428 464 aaKnown RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 RPS26P11Q5JNZ5 115 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
CLIP4-208ENST00000456385 PLEKHM3Q6ZWE6 761 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 SHFQ7M4L6 423 aa9.81□□□□□ -0.84
CLIP4-208ENST00000456385 C16orf62Q7Z3J2 963 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms