RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GBX1Q14549 363 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TIGD6Q17RP2 521 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 UGT3A2Q3SY77 523 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TEX30Q5JUR7 227 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PDZK1Q5T2W1 519 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PYHIN1Q6K0P9 492 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF549Q6P9A3 640 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PIWIL4Q7Z3Z4 852 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 SPNS2Q8IVW8 549 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CYP4Z2PQ8N1L4 340 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CELF5Q8N6W0 485 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF540Q8NDQ6 660 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NANPQ8TBE9 248 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TSPEARQ8WU66 669 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 GTF3AQ92664 365 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ISG20Q96AZ6 181 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 QRFPRQ96P65 431 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MRPL57Q9BQC6 102 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 DPCDQ9BVM2 203 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MND1Q9BWT6 205 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 GAREM1Q9H706 876 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 EQTNQ9NQ60 294 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ZNF275Q9NSD4 429 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TMEFF2Q9UIK5 374 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MAGEL2Q9UJ55 1249 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 FBXO10Q9UK96 956 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MGAT4AQ9UM21 535 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 FNDC3AQ9Y2H6 1198 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PKP3Q9Y446 797 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MAB21L2Q9Y586 359 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CHD9Q3L8U1 2897 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 A0A0J9YYE9 177 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 EFCAB7A8K855 629 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NR5A2O00482 541 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NOBOXO60393 691 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 DLX3O60479 287 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 FAM20BO75063 409 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 SOCS5O75159 536 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NDUFS3O75489 264 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CCNDBP1O95273 360 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 WISP3O95389 354 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MATN4O95460 622 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 IGHV2-70P01814 119 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TRBC1P01850 177 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 HLA-DQB1P01920 261 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 IL6P05231 212 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ARSBP15848 533 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 HOXB8P17481 243 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PTAFRP25105 342 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TRHRP34981 398 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 SPAM1P38567 509 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MAP2K3P46734 347 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CDKN1CP49918 316 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PSMD4P55036 377 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 HERVK_113P63132 956 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CSNK2BP67870 215 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 RPA4Q13156 261 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CAPRIN1Q14444 709 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 DMC1Q14565 340 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 FAM98BQ52LJ0 330 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 ZRANB3Q5FWF4 1079 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PSAPL1Q6NUJ1 521 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 C22orf39Q6P5X5 142 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 C19orf48Q6RUI8 117 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 LARP4Q71RC2 724 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PIM3Q86V86 326 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 OR5K1Q8NHB7 308 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 TCEAL3Q969E4 200 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 EID2BQ96D98 161 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 CCDC126Q96EE4 140 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 C10orf90Q96M02 699 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 LRRC3BQ96PB8 259 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 UCN2Q96RP3 112 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 MARVELD1Q9BSK0 173 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 PAPOLGQ9BWT3 736 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 IL1RL2Q9HB29 575 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 SLC52A3Q9NQ40 469 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 IL17CQ9P0M4 197 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 NDRG4Q9ULP0 352 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 INVSQ9Y283 1065 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 OAS3Q9Y6K5 1087 aaKnown RBP7.29□□□□□ -1.24
HDAC9-218ENST00000456174 LAMA3Q16787 3333 aa7.29□□□□□ -1.24
HDAC9-218ENST00000456174 H7C0S8 307 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 WWP2O00308 870 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 HCN1O60741 890 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 CSF2P04141 144 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 S100A8P05109 93 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 ADRB1P08588 477 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 FGF2P09038 288 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 PRF1P14222 555 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 POU3F4P49335 361 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 TTPAP49638 278 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 ATP12AP54707 1039 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 BPIFB3P59826 476 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 YBX1P67809 324 aaKnown RBP7.28□□□□□ -1.24
HDAC9-218ENST00000456174 PSPHP78330 225 aa7.28□□□□□ -1.24
HDAC9-218ENST00000456174 TIAL1Q01085 375 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC9-218ENST00000456174 CSTF1Q05048 431 aaKnown RBP7.28□□□□□ -1.24
HDAC9-218ENST00000456174 CHRNB3Q05901 458 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms