RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 BIRC5O15392 142 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 GPR42O15529 346 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MITFO75030 526 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ATG13O75143 517 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NIPSNAP2O75323 286 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC25A12O75746 678 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TM7SF2O76062 418 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLCO2B1O94956 709 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC25A14O95258 325 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIM16O95361 564 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TSPAN12O95859 305 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 PAK4O96013 591 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SOD1P00441 154 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 IGLV3-19P01714 112 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 BPGMP07738 259 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ATP1B2P14415 290 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CPA3P15088 417 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TAC1P20366 129 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MSH3P20585 1137 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 GPR1P46091 355 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF81P51508 661 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TPMTP51580 245 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ADPRHP54922 357 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 YPEL5P62699 121 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ADAM8P78325 824 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 IRX4P78413 519 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MRPL28Q13084 256 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SGCGQ13326 291 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 PDK4Q16654 411 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM83EQ2M2I3 478 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCDC153Q494R4 210 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 GXYLT1Q4G148 440 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZMAT1Q5H9K5 638 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 LDLRAP1Q5SW96 308 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SEL1L3Q68CR1 1132 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 KIAA1161Q6NSJ0 714 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 UGT3A1Q6NUS8 523 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 PNCKQ6P2M8 343 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ACSM6Q6P461 480 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 RGS9BPQ6ZS82 235 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SPATA19Q7Z5L4 167 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ISCA2Q86U28 154 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM124AQ86V42 546 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TAX1BP1Q86VP1 789 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 HORMAD1Q86X24 394 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NUDCD3Q8IVD9 361 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MMP21Q8N119 569 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SIRT6Q8N6T7 355 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ENDOVQ8N8Q3 282 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 RASGEF1AQ8N9B8 481 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SIDT2Q8NBJ9 832 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 DDHD1Q8NEL9 900 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NUDT10Q8NFP7 164 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CD200R1Q8TD46 325 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 BCAS4Q8TDM0 211 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NAT14Q8WUY8 206 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 EEF1AKMT1Q8WVE0 214 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 DYDC1Q8WWB3 177 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF75CPQ92670 426 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 KLK6Q92876 244 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ITFG2Q969R8 447 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CLDN23Q96B33 292 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 FAM136AQ96C01 138 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NUS1Q96E22 293 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SGF29Q96ES7 293 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ELMOD3Q96FG2 381 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRMT61AQ96FX7 289 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 NUDT11Q96G61 164 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 DCUN1D1Q96GG9 259 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MAGEB18Q96M61 343 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TSNARE1Q96NA8 513 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF317Q96PQ6 595 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 VPS35Q96QK1 796 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 GPR21Q99679 349 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 MRPL57Q9BQC6 102 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 H2AFJQ9BTM1 129 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC17A9Q9BYT1 436 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TBC1D17Q9HA65 648 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SYTL2Q9HCH5 934 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CD320Q9NPF0 282 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRMT6Q9UJA5 497 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 GNPTGQ9UJJ9 305 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 TDRD6O60522 2096 aaKnown RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 ARHGEF17Q96PE2 2063 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CUL9Q8IWT3 2517 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 SPAG17Q6Q759 2223 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 PI4KAP42356 2102 aa4.96□□□□□ -1.62
HMGB1P4-201ENST00000455362 CEP192Q8TEP8 1941 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CACNA1EQ15878 2313 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZFC3H1O60293 1989 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 LOC102723996A0A087X1L8 192 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 HTR3EA5X5Y0 456 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 PRR23AA6NEV1 266 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TCP11X1B4DZS4 312 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 E5RI56 91 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 E7ENX8 843 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC33A1O00400 549 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 KLF11O14901 512 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms