RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ATP5A1P25705 553 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 DEKP35659 375 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 GGT5P36269 586 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 DLX5P56178 289 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 KCNJ2P63252 427 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 POU4F1Q01851 419 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 CHIT1Q13231 466 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 DDX39BQ13838 428 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 HIST2H2ACQ16777 129 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 WLSQ5T9L3 541 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 HIST2H2AA3Q6FI13 130 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 SULT1C3Q6IMI6 304 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 OR4N5Q8IXE1 308 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 C9orf40Q8IXQ3 194 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ZZZ3Q8IYH5 903 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 RNF175Q8N4F7 328 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ACOT4Q8N9L9 421 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 PDPRQ8NCN5 879 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 OR8K3Q8NH51 312 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ZNF473Q8WTR7 871 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ANP32BQ92688 251 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ANKRD9Q96BM1 317 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 WDR34Q96EX3 536 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 TSPAN17Q96FV3 270 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 DGAT2Q96PD7 388 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 GAL3ST4Q96RP7 486 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 KRT12Q99456 494 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 TBCDQ9BTW9 1192 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 SORBS1Q9BX66 1292 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ROGDIQ9GZN7 287 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ZNF703Q9H7S9 590 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 DNAJB12Q9NXW2 375 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 TXNDC16Q9P2K2 825 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 RNF112Q9ULX5 631 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 A0A1B0GVC2 190 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SUPT3HB4E1H0 165 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 E7ESA3 106 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 ZSCAN12O43309 604 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SUSD5O60279 629 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SUPT3HO75486 399 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 TGFB1P01137 390 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 STMN1P16949 149 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SSTR1P30872 391 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 RPL21P46778 160 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 IST1P53990 364 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 ATP6V0D1P61421 351 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 MRPS25P82663 173 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 PLIN5Q00G26 463 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 LAPTM5Q13571 262 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SLC10A1Q14973 349 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 HYAL4Q2M3T9 481 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 DGAT2L6Q6ZPD8 337 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 LRRC70Q7Z2Q7 622 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 FAM13CQ8NE31 585 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SRFBP1Q8NEF9 429 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SLC22A8Q8TCC7 542 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 CDKL2Q92772 493 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 PPWD1Q96BP3 646 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SARAFQ96BY9 339 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SPACA9Q96E40 222 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SENP5Q96HI0 755 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 JSRP1Q96MG2 331 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 GPR22Q99680 433 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 RBBP8Q99708 897 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 GPATCH1Q9BRR8 931 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 PHACTR1Q9C0D0 580 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SLC6A15Q9H2J7 730 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 OR51B5Q9H339 312 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 ALG9Q9H6U8 611 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SLC24A3Q9HC58 644 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 BOKQ9UMX3 212 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SNX24Q9Y343 169 aa10.77□□□□□ -0.69
GARNL3-210ENST00000453030 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.77□□□□□ -0.69
GARNL3-210ENST00000453030 LRRC3CA6NJW4 275 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 DYRK3O43781 588 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 SCELO95171 688 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 RFPL3SP0C7P2 107 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 STT3AP46977 705 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 TRPC1P48995 793 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 RAP1GDS1P52306 607 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 HERVK_113P63132 956 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 ERVK-8P63133 956 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 TNFRSF17Q02223 184 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 FOLH1Q04609 750 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 MPEG1Q2M385 716 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 ZNF791Q3KP31 576 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-210ENST00000453030 SLC25A35Q3KQZ1 300 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 TMEM35AQ53FP2 167 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 PIGGQ5H8A4 983 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 CDKL4Q5MAI5 379 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 KHDRBS2Q5VWX1 349 aaKnown RBP10.76□□□□□ -0.69
GARNL3-210ENST00000453030 SLC22A10Q63ZE4 541 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 MED27Q6P2C8 311 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
GARNL3-210ENST00000453030 ARSKQ6UWY0 536 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms